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    LOC101066156 E3 ubiquitin-protein ligase KCMF1-like [ Takifugu rubripes (torafugu) ]

    Gene ID: 101066156, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC101066156
    Gene description
    E3 ubiquitin-protein ligase KCMF1-like
    See related
    Ensembl:ENSTRUG00000016694
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Takifugu rubripes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
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    Genomic context

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    Location:
    chromosome: 21
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current fTakRub1.2 (GCF_901000725.2) 21 NC_042305.1 (14375657..14380715)
    101 previous assembly FUGU5 (GCF_000180615.1) 21 NC_018910.1 (10233725..10238782)

    Chromosome 21 - NC_042305.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115247605 Neighboring gene lipase, endothelial Neighboring gene solute carrier family 20 member 2 Neighboring gene methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like Neighboring gene epigen-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in synaptic signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase KCMF1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fTakRub1.2 Primary Assembly

    Genomic

    1. NC_042305.1 Reference fTakRub1.2 Primary Assembly

      Range
      14375657..14380715
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003975022.3 → XP_003975071.1  E3 ubiquitin-protein ligase KCMF1-like

      UniProtKB/TrEMBL
      A0A3B5KIY9, H2V0I4
      Related
      ENSTRUP00000055361.1, ENSTRUT00000054243.2
      Conserved Domains (2) summary
      cd02338
      Location:7 → 55
      ZZ_PCMF_like; Zinc finger, ZZ type. Zinc finger present in potassium channel modulatory factor (PCMF) 1 and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Human potassium channel ...
      pfam05605
      Location:78 → 136
      zf-Di19; Drought induced 19 protein (Di19), zinc-binding
    Nucleotide Protein
    Heading Accession and Version

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