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    LOC100230680 homeobox protein NANOG [ Taeniopygia guttata (zebra finch) ]

    Gene ID: 100230680, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC100230680
    Gene description
    homeobox protein NANOG
    See related
    Ensembl:ENSTGUG00000013121
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Taeniopygia guttata
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
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    Genomic context

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    See LOC100230680 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current bTaeGut1.4.pri (GCF_003957565.2) 1 NC_044211.2 (28084179..28090419, complement)
    105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 1 NC_044998.1 (28362237..28366883, complement)

    Chromosome 1 - NC_044211.2Genomic Context describing neighboring genes Neighboring gene solute carrier family 2, facilitated glucose transporter member 3 Neighboring gene homeobox protein NANOG Neighboring gene uncharacterized LOC101233449 Neighboring gene activation induced cytidine deaminase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    homeobox protein NANOG

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bTaeGut1.4.pri Primary Assembly

    Genomic

    1. NC_044211.2 Reference bTaeGut1.4.pri Primary Assembly

      Range
      28084179..28090419 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002190696.5 → XP_002190732.5  homeobox protein NANOG

      UniProtKB/TrEMBL
      H0ZSB7
      Conserved Domains (1) summary
      smart00389
      Location:159 → 213
      HOX; Homeodomain
    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases