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    MSX2 msh homeobox 2 [ Pongo abelii (Sumatran orangutan) ]

    Gene ID: 100445307, updated on 26-Mar-2024

    Summary

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    Gene symbol
    MSX2
    Gene description
    msh homeobox 2
    Locus tag
    CR201_G0004848
    See related
    Ensembl:ENSPPYG00000016061
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pongo abelii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
    Orthologs
    human mouse all
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    Genomic context

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    See MSX2 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 4 NC_071989.2 (183598375..183607448)
    RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 5 NC_071990.1 (182790742..182799825)

    Chromosome 4 - NC_071989.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129059631 Neighboring gene uncharacterized LOC103890780 Neighboring gene small ubiquitin-related modifier 2-like Neighboring gene golgin subfamily A member 6B-like Neighboring gene uncharacterized LOC129059633

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in embryonic morphogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    homeobox protein MSX-2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Genomic

    1. NC_071989.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

      Range
      183598375..183607448
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009241298.4 → XP_009239573.2  homeobox protein MSX-2

      UniProtKB/TrEMBL
      A0A2J8X7P1, H2PHF0
      Related
      ENSPPYP00000017974.2
      Conserved Domains (1) summary
      pfam00046
      Location:145 → 199
      Homeobox; Homeobox domain
    Nucleotide Protein
    Heading Accession and Version

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