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    LOC116945041 signal transducer and activator of transcription 5A-like [ Petromyzon marinus (sea lamprey) ]

    Gene ID: 116945041, updated on 11-Apr-2024

    Summary

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    Gene symbol
    LOC116945041
    Gene description
    signal transducer and activator of transcription 5A-like
    See related
    EnsemblRapid:ENSPMAG00000006622
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Petromyzon marinus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Cyclostomata; Hyperoartia; Petromyzontiformes; Petromyzontidae; Petromyzon
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    Genomic context

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    See LOC116945041 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    100 current kPetMar1.pri (GCF_010993605.1) 2 NC_046070.1 (4339837..4392272, complement)

    Chromosome 2 - NC_046070.1Genomic Context describing neighboring genes Neighboring gene proteasome 26S subunit, non-ATPase 3 Neighboring gene NGFI-A-binding protein 1-like Neighboring gene glutaminase liver isoform, mitochondrial-like Neighboring gene uncharacterized LOC116945050 Neighboring gene signal transducer and activator of transcription 1-alpha/beta-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_046070.1 Chromosome 2 Reference kPetMar1.pri Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell surface receptor signaling pathway via JAK-STAT IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cytokine-mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in defense response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in growth hormone receptor signaling pathway via JAK-STAT IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cell population proliferation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to peptide hormone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    signal transducer and activator of transcription 5A-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Petromyzon marinus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference kPetMar1.pri Primary Assembly

    Genomic

    1. NC_046070.1 Reference kPetMar1.pri Primary Assembly

      Range
      4339837..4392272 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032959118.1 → XP_032815009.1  signal transducer and activator of transcription 5A-like

      UniProtKB/TrEMBL
      S4RQ37
      Related
      ENSPMAP00000007323.2, ENSPMAT00000007355.2
      Conserved Domains (3) summary
      cl28920
      Location:195 → 351
      STAT_DBD; DNA-binding domain of Signal Transducer and Activator of Transcription (STAT)
      cl28921
      Location:17 → 172
      STAT_CCD; Coiled-coil domain of Signal Transducer and Activator of Transcription (STAT), also called alpha domain
      cl15255
      Location:434 → 571
      SH2; Src homology 2 (SH2) domain
    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases