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    tbx22 T-box transcription factor 22 [ Oryzias latipes (Japanese medaka) ]

    Gene ID: 101163668, updated on 8-Mar-2024

    Summary

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    Gene symbol
    tbx22
    Gene description
    T-box transcription factor 22
    See related
    EnsemblRapid:ENSORLG00000010380
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryzias latipes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
    Orthologs
    zebrafish all
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    Genomic context

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    See tbx22 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current ASM223467v1 (GCF_002234675.1) 10 NC_019868.2 (27039939..27045046)
    102 previous assembly ASM31367v1 (GCF_000313675.1) 10 NC_019868.1 (23641801..23647693)

    Chromosome 10 - NC_019868.2Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 174 Neighboring gene integral membrane protein 2A Neighboring gene uncharacterized LOC105354976 Neighboring gene histone-lysine N-methyltransferase SETD1B

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell fate specification IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    T-box transcription factor TBX22
    Names
    T-box 22

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM223467v1 Primary Assembly

    Genomic

    1. NC_019868.2 Reference ASM223467v1 Primary Assembly

      Range
      27039939..27045046
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004073654.4 → XP_004073702.2  T-box transcription factor TBX22

      UniProtKB/TrEMBL
      A0A3P9HWX4, H2M3K2
      Related
      ENSORLP00000013007.2, ENSORLT00000013008.3
      Conserved Domains (1) summary
      pfam00907
      Location:159 → 348
      T-box
    Nucleotide Protein
    Heading Accession and Version

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