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    HOXC9 homeobox C9 [ Microcebus murinus (gray mouse lemur) ]

    Gene ID: 105871057, updated on 13-Mar-2024

    Summary

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    Gene symbol
    HOXC9
    Gene description
    homeobox C9
    See related
    Ensembl:ENSMICG00000011714
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Microcebus murinus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Microcebus
    Orthologs
    human mouse all
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    Genomic context

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    See HOXC9 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    101 current Mmur_3.0 (GCF_000165445.2) 7 NC_033666.1 (56965029..56968297, complement)
    100 previous assembly Mmur_2.0 (GCF_000165445.1) Unplaced Scaffold NW_012195041.1 (11404519..11407780)

    Chromosome 7 - NC_033666.1Genomic Context describing neighboring genes Neighboring gene homeobox C6 Neighboring gene homeobox C8 Neighboring gene uncharacterized LOC105871103 Neighboring gene homeobox C10

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in anterior/posterior pattern specification IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in embryonic skeletal system morphogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in proximal/distal pattern formation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    homeobox protein Hox-C9

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Microcebus murinus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmur_3.0 Primary Assembly

    Genomic

    1. NC_033666.1 Reference Mmur_3.0 Primary Assembly

      Range
      56965029..56968297 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012764186.2 → XP_012619640.1  homeobox protein Hox-C9

      See identical proteins and their annotated locations for XP_012619640.1

      UniProtKB/TrEMBL
      A0A8C5XDN8
      Related
      ENSMICP00000010657.1, ENSMICT00000011708.3
      Conserved Domains (2) summary
      smart00389
      Location:192 → 241
      HOX; Homeodomain
      pfam04617
      Location:1 → 179
      Hox9_act; Hox9 activation region
    Nucleotide Protein
    Heading Accession and Version

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