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ECU07_1420 uncharacterized protein [ Encephalitozoon cuniculi GB-M1 ]

Gene ID: 859500, updated on 23-Nov-2023

Summary

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Gene symbol
ECU07_1420
Gene description
uncharacterized protein
Locus tag
ECU07_1420
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Encephalitozoon cuniculi GB-M1 (isolate: GB-M1)
Lineage
Eukaryota; Fungi; Fungi incertae sedis; Microsporidia; Unikaryonidae; Encephalitozoon
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Genomic context

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Location:
chromosome: VII
Exon count:
1
Sequence:
Chromosome: VII; NC_003234.1 (161897..162769)

Chromosome VII - NC_003234.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene 60S ribosomal protein L17 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003234.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of transcriptional signals in Encephalitozoon cuniculi widespread among Microsporidia phylum: support for accurate structural genome annotation. Peyretaillade E, et al. BMC Genomics, 2009 Dec 15. PMID 20003517, Free PMC Article
  2. Genome sequence and gene compaction of the eukaryote parasite Encephalitozoon cuniculi. Katinka MD, et al. Nature, 2001 Nov 22. PMID 11719806

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in proteolysis involved in protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of proteasome core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
NP_586070.1
  • 07_1420, 20S PROTEASOME ALPHA-TYPE SUBUNIT, COMPONENT C5, PRC5_RAT, gene found by Glimmer

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003234.1 Reference assembly

    Range
    161897..162769
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001041692.1 → NP_586070.1  uncharacterized protein ECU07_1420 [Encephalitozoon cuniculi GB-M1]

    See identical proteins and their annotated locations for NP_586070.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q8SRH6
    UniProtKB/TrEMBL
    M1KKN9
    Conserved Domains (2) summary
    COG0638
    Location:82 → 286
    PRE1; 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover, chaperones]
    cd03757
    Location:83 → 290
    proteasome_beta_type_1; proteasome beta type-1 subunit. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8SRH6.1

Gene LinkOut

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Molecular Biology Databases