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Camta Calmodulin-binding transcription activator [ Apis mellifera (honey bee) ]

Gene ID: 724592, updated on 23-May-2024

Summary

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Gene symbol
Camta
Gene description
Calmodulin-binding transcription activator
Gene type
protein coding
RefSeq status
MODEL
Organism
Apis mellifera
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
Also known as
GB48002
Orthologs
fruit fly all
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Genomic context

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See Camta in Genome Data Viewer
Location:
chromosome: LG13
Exon count:
19
Annotation release Status Assembly LG Location
104 current Amel_HAv3.1 (GCF_003254395.2) LG13 NC_037650.1 (4566183..4607029)
103 previous assembly Amel_4.5 (GCF_000002195.4) LG13 NC_007082.3 (3028309..3127523, complement)

Linkage Group LG13 - NC_037650.1Genomic Context describing neighboring genes Neighboring gene peroxisomal membrane protein PEX14 Neighboring gene CTD nuclear envelope phosphatase 1-like protein dullard Neighboring gene adaptor protein complex 2, mu subunit Neighboring gene RING finger protein nhl-1 Neighboring gene cilia- and flagella-associated protein 251-like Neighboring gene uncharacterized LOC113219202

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Differential expression of endogenous plant cell wall degrading enzyme genes in the stick insect (Phasmatodea) midgut. Shelomi M, et al. BMC Genomics, 2014 Oct 21. PMID 25331961, Free PMC Article
  2. Insights into social insects from the genome of the honeybee Apis mellifera. Honeybee Genome Sequencing Consortium. Nature, 2006 Oct 26. PMID 17073008, Free PMC Article
  3. ProtoBee: hierarchical classification and annotation of the honey bee proteome. Kaplan N, et al. Genome Res, 2006 Nov. PMID 17065614, Free PMC Article
  4. Finding the missing honey bee genes: lessons learned from a genome upgrade. Elsik CG, et al. BMC Genomics, 2014 Jan 30. PMID 24479613, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables double-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calmodulin-binding transcription activator 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Amel_HAv3.1 Primary Assembly

Genomic

  1. NC_037650.1 Reference Amel_HAv3.1 Primary Assembly

    Range
    4566183..4607029
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026444834.1 → XP_026300619.1  calmodulin-binding transcription activator 2 isoform X1

    UniProtKB/TrEMBL
    A0A7M7MT58, A0A7M7MT84, A0A8B8H9B8, A0A8B8H9C2
    Conserved Domains (4) summary
    smart01076
    Location:190 → 306
    CG-1; CG-1 domains are highly conserved domains of about 130 amino-acid residues
    sd00045
    Location:787 → 828
    ANK; ANK repeat [structural motif]
    pfam01833
    Location:642 → 723
    TIG; IPT/TIG domain
    pfam12796
    Location:791 → 884
    Ank_2; Ankyrin repeats (3 copies)

  2. XM_026444839.1 → XP_026300624.1  calmodulin-binding transcription activator 2 isoform X4

    UniProtKB/TrEMBL
    A0A7M7MU21, A0A8B8HCT0
    Conserved Domains (4) summary
    smart01076
    Location:190 → 306
    CG-1; CG-1 domains are highly conserved domains of about 130 amino-acid residues
    sd00045
    Location:787 → 828
    ANK; ANK repeat [structural motif]
    pfam01833
    Location:642 → 723
    TIG; IPT/TIG domain
    pfam12796
    Location:791 → 884
    Ank_2; Ankyrin repeats (3 copies)

  3. XM_026444838.1 → XP_026300623.1  calmodulin-binding transcription activator 2 isoform X3

    UniProtKB/TrEMBL
    A0A7M7MTH2, A0A8B8HAE0
    Conserved Domains (4) summary
    smart01076
    Location:190 → 306
    CG-1; CG-1 domains are highly conserved domains of about 130 amino-acid residues
    sd00045
    Location:787 → 828
    ANK; ANK repeat [structural motif]
    pfam01833
    Location:642 → 723
    TIG; IPT/TIG domain
    pfam12796
    Location:791 → 884
    Ank_2; Ankyrin repeats (3 copies)

  4. XM_026444840.1 → XP_026300625.1  calmodulin-binding transcription activator 2 isoform X5

    UniProtKB/TrEMBL
    A0A7M7SRJ4, A0A8B8H9C3
    Conserved Domains (4) summary
    smart01076
    Location:190 → 306
    CG-1; CG-1 domains are highly conserved domains of about 130 amino-acid residues
    sd00045
    Location:787 → 828
    ANK; ANK repeat [structural motif]
    pfam01833
    Location:642 → 723
    TIG; IPT/TIG domain
    pfam12796
    Location:791 → 884
    Ank_2; Ankyrin repeats (3 copies)

  5. XM_026444835.1 → XP_026300620.1  calmodulin-binding transcription activator 2 isoform X1

    UniProtKB/TrEMBL
    A0A7M7MT58, A0A7M7MT84, A0A8B8H9B8, A0A8B8H9C2
    Conserved Domains (4) summary
    smart01076
    Location:190 → 306
    CG-1; CG-1 domains are highly conserved domains of about 130 amino-acid residues
    sd00045
    Location:787 → 828
    ANK; ANK repeat [structural motif]
    pfam01833
    Location:642 → 723
    TIG; IPT/TIG domain
    pfam12796
    Location:791 → 884
    Ank_2; Ankyrin repeats (3 copies)

  6. XM_026444837.1 → XP_026300622.1  calmodulin-binding transcription activator 2 isoform X2

    UniProtKB/TrEMBL
    A0A7M7MTK8, A0A8B8H9B6
    Conserved Domains (4) summary
    smart01076
    Location:190 → 306
    CG-1; CG-1 domains are highly conserved domains of about 130 amino-acid residues
    sd00045
    Location:787 → 828
    ANK; ANK repeat [structural motif]
    pfam01833
    Location:642 → 723
    TIG; IPT/TIG domain
    pfam12796
    Location:791 → 884
    Ank_2; Ankyrin repeats (3 copies)

  7. XM_026444836.1 → XP_026300621.1  calmodulin-binding transcription activator 2 isoform X1

    UniProtKB/TrEMBL
    A0A7M7MT58, A0A7M7MT84, A0A8B8H9B8, A0A8B8H9C2
    Conserved Domains (4) summary
    smart01076
    Location:190 → 306
    CG-1; CG-1 domains are highly conserved domains of about 130 amino-acid residues
    sd00045
    Location:787 → 828
    ANK; ANK repeat [structural motif]
    pfam01833
    Location:642 → 723
    TIG; IPT/TIG domain
    pfam12796
    Location:791 → 884
    Ank_2; Ankyrin repeats (3 copies)

  8. XM_026444842.1 → XP_026300627.1  calmodulin-binding transcription activator 2 isoform X7

    UniProtKB/TrEMBL
    A0A7M7SRL9, A0A8B8H9C1
    Conserved Domains (4) summary
    smart01076
    Location:7 → 112
    CG-1; CG-1 domains are highly conserved domains of about 130 amino-acid residues
    sd00045
    Location:593 → 634
    ANK; ANK repeat [structural motif]
    pfam01833
    Location:448 → 529
    TIG; IPT/TIG domain
    pfam12796
    Location:597 → 690
    Ank_2; Ankyrin repeats (3 copies)

  9. XM_026444841.1 → XP_026300626.1  calmodulin-binding transcription activator 2 isoform X6

    UniProtKB/TrEMBL
    A0A7M7MT00, A0A8B8H9C7
    Conserved Domains (4) summary
    smart01076
    Location:44 → 160
    CG-1; CG-1 domains are highly conserved domains of about 130 amino-acid residues
    sd00045
    Location:641 → 682
    ANK; ANK repeat [structural motif]
    pfam01833
    Location:496 → 577
    TIG; IPT/TIG domain
    pfam12796
    Location:645 → 738
    Ank_2; Ankyrin repeats (3 copies)
Nucleotide Protein Strain
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