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TUBA4A tubulin alpha 4a [ Canis lupus familiaris (dog) ]

Gene ID: 478918, updated on 17-Aug-2024

Summary

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Official Symbol
TUBA4Aprovided by VGNC
Official Full Name
tubulin alpha 4aprovided by VGNC
Primary source
VGNC:VGNC:55011
See related
Ensembl:ENSCAFG00845029842
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
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Genomic context

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See TUBA4A in Genome Data Viewer
Location:
chromosome: 37
Exon count:
5
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 37 NC_051841.1 (25814305..25818478, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 37 NC_006619.4 (26624976..26629142, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 37 NC_049258.1 (25674711..25678885, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 37 NC_049297.1 (25718693..25722858, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 37 NC_049778.1 (25653811..25657976, complement)

Chromosome 37 - NC_051841.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1 Neighboring gene galactosidase beta 1 like Neighboring gene serine/threonine kinase 16 Neighboring gene uncharacterized LOC102155449 Neighboring gene tubulin alpha-1B chain Neighboring gene DnaJ heat shock protein family (Hsp40) member B2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tubulin alpha-4A chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051841.1 Reference ROS_Cfam_1.0

    Range
    25814305..25818478 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038448024.1 → XP_038303952.1  tubulin alpha-4A chain isoform X2

    UniProtKB/TrEMBL
    A0A8C0NVV2, A0A8I3PJF5
    Conserved Domains (1) summary
    PTZ00335
    Location:1 → 433
    PTZ00335; tubulin alpha chain; Provisional

  2. XM_038448023.1 → XP_038303951.1  tubulin alpha-4A chain isoform X1

    UniProtKB/TrEMBL
    A0A8C0LT90, A0A8C0MZ87, A0A8C0Z5X5, A0A8I3Q1H9
    Related
    ENSCAFP00845041485.1, ENSCAFT00845052841.1
    Conserved Domains (1) summary
    PTZ00335
    Location:1 → 448
    PTZ00335; tubulin alpha chain; Provisional

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049297.1 Alternate UMICH_Zoey_3.1

    Range
    25718693..25722858 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038522009.1 → XP_038377937.1  tubulin alpha-4A chain isoform X2

    Conserved Domains (1) summary
    PTZ00335
    Location:1 → 433
    PTZ00335; tubulin alpha chain; Provisional

  2. XM_038522008.1 → XP_038377936.1  tubulin alpha-4A chain isoform X1

    Conserved Domains (1) summary
    PTZ00335
    Location:1 → 448
    PTZ00335; tubulin alpha chain; Provisional

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049778.1 Alternate UNSW_CanFamBas_1.0

    Range
    25653811..25657976 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038650193.1 → XP_038506121.1  tubulin alpha-4A chain isoform X2

    Conserved Domains (1) summary
    PTZ00335
    Location:1 → 433
    PTZ00335; tubulin alpha chain; Provisional

  2. XM_038650192.1 → XP_038506120.1  tubulin alpha-4A chain isoform X1

    Conserved Domains (1) summary
    PTZ00335
    Location:1 → 448
    PTZ00335; tubulin alpha chain; Provisional

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049258.1 Alternate UU_Cfam_GSD_1.0

    Range
    25674711..25678885 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038585816.1 → XP_038441744.1  tubulin alpha-4A chain isoform X2

    UniProtKB/TrEMBL
    A0A8C0NVV2, A0A8I3PJF5
    Conserved Domains (1) summary
    PTZ00335
    Location:1 → 433
    PTZ00335; tubulin alpha chain; Provisional

  2. XM_038585815.1 → XP_038441743.1  tubulin alpha-4A chain isoform X1

    UniProtKB/TrEMBL
    A0A8C0LT90, A0A8C0MZ87, A0A8C0Z5X5, A0A8I3Q1H9
    Conserved Domains (1) summary
    PTZ00335
    Location:1 → 448
    PTZ00335; tubulin alpha chain; Provisional

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006619.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    26624976..26629142 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005640689.4 → XP_005640746.1  tubulin alpha-4A chain isoform X2

    See identical proteins and their annotated locations for XP_005640746.1

    UniProtKB/TrEMBL
    A0A8C0NVV2, A0A8I3PJF5
    Conserved Domains (1) summary
    PTZ00335
    Location:1 → 433
    PTZ00335; tubulin alpha chain; Provisional

  2. XM_536077.7 → XP_536077.2  tubulin alpha-4A chain isoform X1

    See identical proteins and their annotated locations for XP_536077.2

    UniProtKB/TrEMBL
    A0A8C0LT90, A0A8C0MZ87, A0A8C0Z5X5, A0A8I3Q1H9
    Conserved Domains (1) summary
    PTZ00335
    Location:1 → 448
    PTZ00335; tubulin alpha chain; Provisional
Nucleotide Protein
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