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LOC4346596 enoyl-[acyl-carrier-protein] reductase [NADH] 2, chloroplastic-like [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4346596, updated on 16-Jul-2024

Summary

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Gene symbol
LOC4346596
Gene description
enoyl-[acyl-carrier-protein] reductase [NADH] 2, chloroplastic-like
Locus tag
OSNPB_090277800
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
ENR
Expression
Broad expression in flower buds (RPKM 20.7), flowers (RPKM 18.7) and 6 other tissues See more
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Genomic context

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Location:
chromosome: 9
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 9 NC_089043.1 (10110215..10114416)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 9 NC_029264.1 (5781797..5785967)

Chromosome 9 - NC_089043.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136351673 Neighboring gene uncharacterized LOC9266872 Neighboring gene 18 kDa seed maturation protein Neighboring gene putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D Neighboring gene uncharacterized LOC4346598

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome profiling of various organs at different developmental stages in rice Transcriptome profiling of various organs at different developmental stages in rice
  • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
  • BioProject: PRJNA243371
  • Publication: PMID 26387578
  • Analysis date: Fri Dec 15 20:02:59 2017

Bibliography

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Related articles in PubMed

  1. Large-scale identification of expressed sequence tags involved in rice and rice blast fungus interaction. Jantasuriyarat C, et al. Plant Physiol, 2005 May. PMID 15888683, Free PMC Article
  2. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables enoyl-[acyl-carrier-protein] reductase (NADH) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
enoyl-[acyl-carrier-protein] reductase [NADH] 2, chloroplastic
Names
LOC_Os09g10600
NADH-dependent enoyl-ACP reductase
P0701E06.10
putative enoyl-ACP reductase
NP_001409640.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001422711.1 → NP_001409640.1  enoyl-[acyl-carrier-protein] reductase [NADH] 2, chloroplastic

    Status: VALIDATED

    Source sequence(s)
    AP014965, CB645110, CB645111, CI105704, CI308263
    UniProtKB/Swiss-Prot
    A0A0P0XJW8, Q6H5J0
    UniProtKB/TrEMBL
    B8BDP7, B9G2I5

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089043.1 Reference ASM3414082v1 Primary Assembly

    Range
    10110215..10114416
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6H5J0.1 GenPept UniProtKB/Swiss-Prot:Q6H5J0

Gene LinkOut

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Molecular Biology Databases
Research Materials