U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

RHBDL3 rhomboid like 3 [ Gallus gallus (chicken) ]

Gene ID: 417411, updated on 5-Mar-2024

Summary

Go to the top of the page Help
Symbol
RHBDL3provided by CGNC
Full Name
rhomboid like 3provided by CGNC
Primary source
CGNC:2496
See related
Ensembl:ENSGALG00010029603
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 18
Exon count:
14
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 18 NC_052549.1 (7307059..7356775)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 18 NC_052590.1 (6902190..6951896)

Chromosome 18 - NC_052549.1Genomic Context describing neighboring genes Neighboring gene cytokine receptor like factor 3 Neighboring gene ArfGAP with dual PH domains 2 Neighboring gene ras homolog family member T1 Neighboring gene uncharacterized LOC124417296 Neighboring gene C17orf75 homolog Neighboring gene zinc finger protein 207 Neighboring gene uncharacterized LOC121107129 Neighboring gene endoplasmic reticulum to nucleus signaling 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
rhomboid-related protein 3
Names
rhomboid, veinlet-like 3
XP_015135402.1
XP_015135403.1
XP_015135404.1
XP_015135405.2
XP_040505709.1
XP_040505710.1
XP_040505712.1
XP_040505713.1
XP_040542376.1
XP_040542377.1
XP_040542378.1
XP_040542379.1
XP_040542380.1
XP_040542381.1
XP_040542384.1
XP_040542385.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052549.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    7307059..7356775
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040649776.2 → XP_040505710.1  rhomboid-related protein 3 isoform X6

    UniProtKB/TrEMBL
    A0A8V1AJF0
    Conserved Domains (2) summary
    pfam01694
    Location:161 → 315
    Rhomboid; Rhomboid family
    pfam13499
    Location:1 → 56
    EF-hand_7; EF-hand domain pair

  2. XM_040649779.2 → XP_040505713.1  rhomboid-related protein 3 isoform X7

    UniProtKB/TrEMBL
    A0A8V1AJF0
    Conserved Domains (1) summary
    pfam01694
    Location:107 → 261
    Rhomboid; Rhomboid family

  3. XM_040649775.2 → XP_040505709.1  rhomboid-related protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A8V1AE12, A0A8V1APF0
    Related
    ENSGALP00010044257.1, ENSGALT00010071567.1
    Conserved Domains (2) summary
    COG0705
    Location:196 → 391
    GlpG; Membrane associated serine protease, rhomboid family [Posttranslational modification, protein turnover, chaperones]
    COG5126
    Location:17 → 130
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

  4. XM_015279916.4 → XP_015135402.1  rhomboid-related protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A8V1AE12, A0A8V1AJE5
    Related
    ENSGALP00010044258.1, ENSGALT00010071568.1
    Conserved Domains (2) summary
    pfam01694
    Location:208 → 362
    Rhomboid; Rhomboid family
    pfam13499
    Location:39 → 103
    EF-hand_7; EF-hand domain pair

  5. XM_015279919.4 → XP_015135405.2  rhomboid-related protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A8V1AJF0, A0A8V1AL55
    Related
    ENSGALP00010044260.1, ENSGALT00010071570.1
    Conserved Domains (2) summary
    COG0705
    Location:188 → 383
    GlpG; Membrane associated serine protease, rhomboid family [Posttranslational modification, protein turnover, chaperones]
    COG5126
    Location:62 → 122
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

  6. XM_015279917.4 → XP_015135403.1  rhomboid-related protein 3 isoform X4

    UniProtKB/TrEMBL
    A0A8V1AJF0, A0A8V1AMX6
    Related
    ENSGALP00010044259.1, ENSGALT00010071569.1
    Conserved Domains (2) summary
    pfam01694
    Location:200 → 354
    Rhomboid; Rhomboid family
    pfam13499
    Location:41 → 95
    EF-hand_7; EF-hand domain pair

  7. XM_040649778.2 → XP_040505712.1  rhomboid-related protein 3 isoform X7

    UniProtKB/TrEMBL
    A0A8V1AJF0
    Conserved Domains (1) summary
    pfam01694
    Location:107 → 261
    Rhomboid; Rhomboid family

  8. XM_015279918.4 → XP_015135404.1  rhomboid-related protein 3 isoform X5

    UniProtKB/TrEMBL
    A0A8V1AE07, A0A8V1AJF0
    Related
    ENSGALP00010044256.1, ENSGALT00010071566.1
    Conserved Domains (2) summary
    pfam01694
    Location:170 → 324
    Rhomboid; Rhomboid family
    pfam13499
    Location:1 → 65
    EF-hand_7; EF-hand domain pair

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052590.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    6902190..6951896
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040686447.2 → XP_040542381.1  rhomboid-related protein 3 isoform X6

    UniProtKB/TrEMBL
    A0A8V1AJF0
    Conserved Domains (2) summary
    pfam01694
    Location:161 → 315
    Rhomboid; Rhomboid family
    pfam13499
    Location:1 → 56
    EF-hand_7; EF-hand domain pair

  2. XM_040686451.2 → XP_040542385.1  rhomboid-related protein 3 isoform X7

    UniProtKB/TrEMBL
    A0A8V1AJF0
    Conserved Domains (1) summary
    pfam01694
    Location:107 → 261
    Rhomboid; Rhomboid family

  3. XM_040686442.2 → XP_040542376.1  rhomboid-related protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A8V1AE12, A0A8V1APF0
    Conserved Domains (2) summary
    COG0705
    Location:196 → 391
    GlpG; Membrane associated serine protease, rhomboid family [Posttranslational modification, protein turnover, chaperones]
    COG5126
    Location:17 → 130
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

  4. XM_040686444.2 → XP_040542378.1  rhomboid-related protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A8V1AE12, A0A8V1AJE5
    Conserved Domains (2) summary
    pfam01694
    Location:208 → 362
    Rhomboid; Rhomboid family
    pfam13499
    Location:39 → 103
    EF-hand_7; EF-hand domain pair

  5. XM_040686443.2 → XP_040542377.1  rhomboid-related protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A8V1AJF0, A0A8V1AL55
    Conserved Domains (2) summary
    COG0705
    Location:188 → 383
    GlpG; Membrane associated serine protease, rhomboid family [Posttranslational modification, protein turnover, chaperones]
    COG5126
    Location:62 → 122
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

  6. XM_040686445.2 → XP_040542379.1  rhomboid-related protein 3 isoform X4

    UniProtKB/TrEMBL
    A0A8V1AJF0, A0A8V1AMX6
    Conserved Domains (2) summary
    pfam01694
    Location:200 → 354
    Rhomboid; Rhomboid family
    pfam13499
    Location:41 → 95
    EF-hand_7; EF-hand domain pair

  7. XM_040686450.2 → XP_040542384.1  rhomboid-related protein 3 isoform X7

    UniProtKB/TrEMBL
    A0A8V1AJF0
    Conserved Domains (1) summary
    pfam01694
    Location:107 → 261
    Rhomboid; Rhomboid family

  8. XM_040686446.2 → XP_040542380.1  rhomboid-related protein 3 isoform X5

    UniProtKB/TrEMBL
    A0A8V1AE07, A0A8V1AJF0
    Conserved Domains (2) summary
    pfam01694
    Location:170 → 324
    Rhomboid; Rhomboid family
    pfam13499
    Location:1 → 65
    EF-hand_7; EF-hand domain pair
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Miscellaneous