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VSX2 visual system homeobox 2 [ Gorilla gorilla gorilla (western lowland gorilla) ]

Gene ID: 101145043, updated on 8-Mar-2024

Summary

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Gene symbol
VSX2
Gene description
visual system homeobox 2
See related
Ensembl:ENSGGOG00000002583
Gene type
protein coding
RefSeq status
MODEL
Organism
Gorilla gorilla gorilla (sub-species: gorilla)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2) 15 NC_073239.2 (91098446..91121728)
RS_2023_04 previous assembly NHGRI_mGorGor1-v1.1-0.2.freeze_pri (GCF_029281585.1) 14 NC_073238.1 (82921474..82944802)

Chromosome 15 - NC_073239.2Genomic Context describing neighboring genes Neighboring gene basal body orientation factor 1 Neighboring gene aldehyde dehydrogenase 6 family member A1 Neighboring gene lin-52 DREAM MuvB core complex component Neighboring gene small ubiquitin-related modifier 2-like Neighboring gene activated RNA polymerase II transcriptional coactivator p15-like Neighboring gene ATP binding cassette subfamily D member 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific double-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
visual system homeobox 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029281585.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

Genomic

  1. NC_073239.2 Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

    Range
    91098446..91121728
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004055431.4 → XP_004055479.3  visual system homeobox 2 isoform X2

  2. XM_055360919.2 → XP_055216894.2  visual system homeobox 2 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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