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LOC100881160 centrosome-associated zinc finger protein CP190-like [ Megachile rotundata (alfalfa leafcutting bee) ]

Gene ID: 100881160, updated on 22-Oct-2023

Summary

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Gene symbol
LOC100881160
Gene description
centrosome-associated zinc finger protein CP190-like
See related
EnsemblRapid:LOC100881160
Gene type
protein coding
RefSeq status
MODEL
Organism
Megachile rotundata
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Megachilidae; Megachilinae; Megachile
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Genomic context

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See LOC100881160 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
101 current MROT_1.0 (GCF_000220905.1) Unplaced Scaffold NW_003797154.1 (863296..869765, complement)

NW_003797154.1Genomic Context describing neighboring genes Neighboring gene neuronal PAS domain-containing protein 4 Neighboring gene uncharacterized LOC105662234 Neighboring gene D-glucuronyl C5-epimerase Neighboring gene ADP-ribosylation factor 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003797154.1 Unplaced Scaffold Reference MROT_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
centrosome-associated zinc finger protein CP190-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Megachile rotundata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MROT_1.0

Genomic

  1. NW_003797154.1 Reference MROT_1.0

    Range
    863296..869765 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003702405.2 → XP_003702453.2  centrosome-associated zinc finger protein CP190-like isoform X1

    Related
    XP_003702453.2, XM_003702405.2
    Conserved Domains (3) summary
    smart00225
    Location:70 → 162
    BTB; Broad-Complex, Tramtrack and Bric a brac
    sd00017
    Location:530 → 550
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:59 → 162
    BTB; BTB/POZ domain

  2. XM_012283288.1 → XP_012138678.1  centrosome-associated zinc finger protein CP190-like isoform X2

    See identical proteins and their annotated locations for XP_012138678.1

    Related
    XP_012138678.1, XM_012283288.1
    Conserved Domains (3) summary
    smart00225
    Location:42 → 134
    BTB; Broad-Complex, Tramtrack and Bric a brac
    sd00017
    Location:502 → 522
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:31 → 134
    BTB; BTB/POZ domain

  3. XM_012283287.1 → XP_012138677.1  centrosome-associated zinc finger protein CP190-like isoform X2

    See identical proteins and their annotated locations for XP_012138677.1

    Related
    XP_012138677.1, XM_012283287.1
    Conserved Domains (3) summary
    smart00225
    Location:42 → 134
    BTB; Broad-Complex, Tramtrack and Bric a brac
    sd00017
    Location:502 → 522
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:31 → 134
    BTB; BTB/POZ domain

  4. XM_012283290.1 → XP_012138680.1  centrosome-associated zinc finger protein CP190-like isoform X2

    See identical proteins and their annotated locations for XP_012138680.1

    Related
    XP_012138680.1, XM_012283290.1
    Conserved Domains (3) summary
    smart00225
    Location:42 → 134
    BTB; Broad-Complex, Tramtrack and Bric a brac
    sd00017
    Location:502 → 522
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:31 → 134
    BTB; BTB/POZ domain

  5. XM_012283286.1 → XP_012138676.1  centrosome-associated zinc finger protein CP190-like isoform X2

    See identical proteins and their annotated locations for XP_012138676.1

    Related
    XP_012138676.1, XM_012283286.1
    Conserved Domains (3) summary
    smart00225
    Location:42 → 134
    BTB; Broad-Complex, Tramtrack and Bric a brac
    sd00017
    Location:502 → 522
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:31 → 134
    BTB; BTB/POZ domain

  6. XM_012283285.1 → XP_012138675.1  centrosome-associated zinc finger protein CP190-like isoform X2

    See identical proteins and their annotated locations for XP_012138675.1

    Related
    XP_012138675.1, XM_012283285.1
    Conserved Domains (3) summary
    smart00225
    Location:42 → 134
    BTB; Broad-Complex, Tramtrack and Bric a brac
    sd00017
    Location:502 → 522
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:31 → 134
    BTB; BTB/POZ domain

  7. XM_012283289.1 → XP_012138679.1  centrosome-associated zinc finger protein CP190-like isoform X2

    See identical proteins and their annotated locations for XP_012138679.1

    Related
    XP_012138679.1, XM_012283289.1
    Conserved Domains (3) summary
    smart00225
    Location:42 → 134
    BTB; Broad-Complex, Tramtrack and Bric a brac
    sd00017
    Location:502 → 522
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:31 → 134
    BTB; BTB/POZ domain
Nucleotide Protein
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