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mrn general transcription factor IIH subunit 4 marionette [ Megachile rotundata (alfalfa leafcutting bee) ]

Gene ID: 100875263, updated on 16-May-2024

Summary

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Gene symbol
mrn
Gene description
general transcription factor IIH subunit 4 marionette
See related
EnsemblRapid:LOC100875263
Gene type
protein coding
RefSeq status
MODEL
Organism
Megachile rotundata
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Megachilidae; Megachilinae; Megachile
Orthologs
fruit fly all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current MROT_1.0 (GCF_000220905.1) Unplaced Scaffold NW_003797131.1 (40963..43446, complement)

NW_003797131.1Genomic Context describing neighboring genes Neighboring gene adrenodoxin-like protein, mitochondrial Neighboring gene Sprouty-related protein with EVH-1 domain Neighboring gene cyclin-C Neighboring gene ceramide synthase 6 Neighboring gene beta-1,4-glucuronyltransferase 1-like Neighboring gene uncharacterized LOC100879254

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003797131.1 Unplaced Scaffold Reference MROT_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables double-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription factor TFIIH core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription factor TFIIH holo complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
general transcription factor IIH subunit 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Megachile rotundata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MROT_1.0

Genomic

  1. NW_003797131.1 Reference MROT_1.0

    Range
    40963..43446 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003701772.2 → XP_003701820.1  general transcription factor IIH subunit 4 isoform X1

    Related
    XP_003701820.1, XM_003701772.2
    Conserved Domains (1) summary
    pfam03849
    Location:23 → 376
    Tfb2; Transcription factor Tfb2

  2. XM_012281824.1 → XP_012137214.1  general transcription factor IIH subunit 4 isoform X2

    Related
    XP_012137214.1, XM_012281824.1
    Conserved Domains (1) summary
    pfam03849
    Location:23 → 368
    Tfb2; Transcription factor Tfb2
Nucleotide Protein
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