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Hoxa9 homeobox A9 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100759995, updated on 8-Mar-2024

Summary

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Gene symbol
Hoxa9
Gene description
homeobox A9
See related
Ensembl:ENSCGRG00015021078
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human all
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Genomic context

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Location:
chromosome: 8
Exon count:
2
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613870.1 (75778..78949, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 8 NC_048601.1 (89119788..89122945)

NW_003613870.1Genomic Context describing neighboring genes Neighboring gene homeobox A3 Neighboring gene uncharacterized LOC113837086 Neighboring gene homeobox A6 Neighboring gene homeobox A7 Neighboring gene homeobox protein Hox-A10 Neighboring gene microRNA mir-196b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in anterior/posterior pattern specification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in embryonic skeletal system morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proximal/distal pattern formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox protein Hox-A9
Names
Homeobox protein Hox-A9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613870.1 Reference CriGri_1.0 Primary Assembly

    Range
    75778..78949 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003501985.5 → XP_003502033.1  homeobox protein Hox-A9

    See identical proteins and their annotated locations for XP_003502033.1

    UniProtKB/TrEMBL
    G3HD80
    Conserved Domains (2) summary
    pfam00046
    Location:208 → 261
    Homeobox; Homeobox domain
    pfam04617
    Location:1 → 192
    Hox9_act; Hox9 activation region

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048601.1 Alternate CriGri-PICRH-1.0

    Range
    89119788..89122945
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027429645.2 → XP_027285446.1  homeobox protein Hox-A9

    UniProtKB/TrEMBL
    G3HD80
    Related
    ENSCGRP00015027785.1, ENSCGRT00015034041.2
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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