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LOC100741370 zinc finger homeobox protein 3 [ Bombus impatiens (common eastern bumble bee) ]

Gene ID: 100741370, updated on 14-Dec-2023

Summary

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Gene symbol
LOC100741370
Gene description
zinc finger homeobox protein 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Bombus impatiens
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Bombus; Pyrobombus
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
103 current BIMP_2.2 (GCF_000188095.3) Unplaced Scaffold NT_176452.1 (1036897..1283608)

NT_176452.1Genomic Context describing neighboring genes Neighboring gene protein FAM49B Neighboring gene uncharacterized LOC117151838 Neighboring gene uncharacterized LOC117151917 Neighboring gene uncharacterized LOC112213066 Neighboring gene uncharacterized LOC117151849 Neighboring gene uncharacterized LOC117151845 Neighboring gene uncharacterized LOC112213129

Genomic regions, transcripts, and products

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Genomic Sequence:
NT_176452 Unplaced Scaffold Reference BIMP_2.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger homeobox protein 3
Names
zinc finger homeobox protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bombus impatiens Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BIMP_2.2

Genomic

  1. NT_176452.1 Reference BIMP_2.2

    Range
    1036897..1283608
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033321904.1 → XP_033177795.1  zinc finger homeobox protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A6P8L207
    Conserved Domains (3) summary
    smart00389
    Location:2007 → 2062
    HOX; Homeodomain
    sd00017
    Location:1219 → 1240
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00046
    Location:2269 → 2322
    Homeobox; Homeobox domain

  2. XM_033321907.1 → XP_033177798.1  zinc finger homeobox protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A6P8L207
    Conserved Domains (3) summary
    smart00389
    Location:2007 → 2062
    HOX; Homeodomain
    sd00017
    Location:1219 → 1240
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00046
    Location:2269 → 2322
    Homeobox; Homeobox domain
Nucleotide Protein
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