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LOC100159989 alpha-protein kinase 1 [ Acyrthosiphon pisum (pea aphid) ]

Gene ID: 100159989, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100159989
Gene description
alpha-protein kinase 1
See related
APHIDBASE:ACYPI001323; EnsemblRapid:LOC100159989
Gene type
protein coding
RefSeq status
MODEL
Organism
Acyrthosiphon pisum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon
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Genomic context

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Location:
chromosome: X
Exon count:
5
Annotation release Status Assembly Chr Location
103 current pea_aphid_22Mar2018_4r6ur (GCF_005508785.1) X NC_042493.1 (76263754..76321118)
102 previous assembly Acyr_2.0 (GCF_000142985.2) Unplaced Scaffold NW_003383533.1 (1093137..1130119, complement)

Chromosome X - NC_042493.1Genomic Context describing neighboring genes Neighboring gene carcinine transporter Neighboring gene ecdysis triggering hormone Neighboring gene uncharacterized LOC100573848 Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-protein kinase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acyrthosiphon pisum Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

Genomic

  1. NC_042493.1 Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

    Range
    76263754..76321118
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029489339.1 → XP_029345199.1  alpha-protein kinase 1

    UniProtKB/TrEMBL
    A0A8R1WY01
    Related
    XP_029345199.1, XM_029489339.1
    Conserved Domains (1) summary
    cd14718
    Location:448 → 517
    bZIP_Maf_large; Basic leucine zipper (bZIP) domain of large musculoaponeurotic fibrosarcoma (Maf) proteins: a DNA-binding and dimerization domain

  2. XM_008180140.3 → XP_008178362.1  alpha-protein kinase 1

    UniProtKB/TrEMBL
    A0A8R1WY01
    Related
    XP_008178362.1, XM_008180140.3
    Conserved Domains (1) summary
    cd14718
    Location:448 → 517
    bZIP_Maf_large; Basic leucine zipper (bZIP) domain of large musculoaponeurotic fibrosarcoma (Maf) proteins: a DNA-binding and dimerization domain

RNA

  1. XR_003839438.1 RNA Sequence

    Related
    XR_003839438.1
Nucleotide Protein
Heading Accession and Version

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