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LOC100141864 paired mesoderm homeobox protein 2A [ Tribolium castaneum (red flour beetle) ]

Gene ID: 100141864, updated on 12-Apr-2024

Summary

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Gene symbol
LOC100141864
Gene description
paired mesoderm homeobox protein 2A
Locus tag
TcasGA2_TC007132
Gene type
protein coding
RefSeq status
MODEL
Organism
Tribolium castaneum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
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Genomic context

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Location:
chromosome: 9
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 9 NC_087402.1 (9005246..9036701, complement)
103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG4 NC_007419.2 (8873375..8903794, complement)

Chromosome 9 - NC_087402.1Genomic Context describing neighboring genes Neighboring gene muscle LIM protein 1 Neighboring gene uncharacterized protein Neighboring gene Muscle protein 20 Neighboring gene uncharacterized LOC107398308 Neighboring gene glucose dehydrogenase [FAD, quinone] Neighboring gene uncharacterized LOC103312826 Neighboring gene RWD domain-containing protein 2A Neighboring gene closca

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
paired mesoderm homeobox protein 2A
Names
AUGUSTUS-3.0.2_07132
AUGUSTUS-3.0.2_07134
GLEAN_07132
GLEAN_07133
GLEAN_07134
Paired mesoderm homeobox protein 2B-like Protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference icTriCast1.1 Primary Assembly

Genomic

  1. NC_087402.1 Reference icTriCast1.1 Primary Assembly

    Range
    9005246..9036701 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008194261.3 → XP_008192483.1  paired mesoderm homeobox protein 2A

    Conserved Domains (1) summary
    pfam00046
    Location:129 → 181
    Homeobox; Homeobox domain
Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases