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PITX3 paired like homeodomain 3 [ Equus caballus (horse) ]

Gene ID: 100060046, updated on 8-Mar-2024

Summary

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Official Symbol
PITX3provided by VGNC
Official Full Name
paired like homeodomain 3provided by VGNC
Primary source
VGNC:VGNC:21480
See related
Ensembl:ENSECAG00000022294
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See PITX3 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 1 NC_009144.3 (28072815..28075555)
102 previous assembly EquCab2.0 (GCF_000002305.2) 1 NC_009144.2 (27890905..27895038)

Chromosome 1 - NC_009144.3Genomic Context describing neighboring genes Neighboring gene pituitary homeobox 3-like Neighboring gene elongation of very long chain fatty acids protein 3-like Neighboring gene uncharacterized LOC111773426 Neighboring gene ELOVL fatty acid elongase 3 Neighboring gene nucleolar and coiled-body phosphoprotein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anatomical structure morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pituitary homeobox 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009144.3 Reference EquCab3.0 Primary Assembly

    Range
    28072815..28075555
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014733225.2 → XP_014588711.1  pituitary homeobox 3

    UniProtKB/TrEMBL
    F6YU92
    Related
    ENSECAP00000019753.2, ENSECAT00000023815.3
    Conserved Domains (2) summary
    pfam00046
    Location:66 → 118
    Homeobox; Homeobox domain
    pfam03826
    Location:258 → 275
    OAR; OAR domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials