U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    SAUR23 SAUR-like auxin-responsive protein family [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831310, updated on 15-Oct-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    SAUR23
    Gene description
    SAUR-like auxin-responsive protein family
    Primary source
    Araport:AT5G18060
    Locus tag
    AT5G18060
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MCM23.16; MCM23_16; SMALL AUXIN UP RNA 23
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (5975780..5976589)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene target of trans acting-siR480/255 protein Neighboring gene SAUR-like auxin-responsive protein family Neighboring gene target of trans acting-siR480/255 protein Neighboring gene phosphoglucosamine mutase-like protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Constitutive Expression of Arabidopsis SMALL AUXIN UP RNA19 (SAUR19) in Tomato Confers Auxin-Independent Hypocotyl Elongation. Spartz AK, et al. Plant Physiol, 2017 Feb. PMID 27999086, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    NM_121811.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in response to auxin IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    SAUR-like auxin-responsive protein family
    NP_197307.1
    • SAUR-like auxin-responsive protein family; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT5G18050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      5975780..5976589
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121811.5 → NP_197307.1  SAUR-like auxin-responsive protein family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197307.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FJF6
      UniProtKB/TrEMBL
      A0A178UM65, A0A5S9Y553
      Conserved Domains (1) summary
      cl23790
      Location:17 → 90
      Auxin_inducible; Auxin responsive protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FJF6.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Tools