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    AT5G10710 centromere protein O [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830936, updated on 15-Feb-2024

    Summary

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    Gene symbol
    AT5G10710
    Gene description
    centromere protein O
    Primary source
    Araport:AT5G10710
    Locus tag
    AT5G10710
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MAJ23.70; MAJ23_70
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    13
    Sequence:
    Chromosome: 5; NC_003076.8 (3378956..3382958)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene calmodulin-binding protein-like protein Neighboring gene pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein Neighboring gene methionyl-tRNA synthetase Neighboring gene ncRNA Neighboring gene Peptidyl-tRNA hydrolase II (PTH2) family protein Neighboring gene ncRNA Neighboring gene histidine kinase 5 Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
    2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714
    4. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001203356.1
    NM_121109.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in centromere complex assembly IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in kinetochore IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    centromere protein O
    NP_001190285.1
    • INVOLVED IN: chromosome segregation, cell division; LOCATED IN: chromosome, centromeric region, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Centromere protein Cenp-O (InterPro:IPR018464).
    NP_001318533.1
    • INVOLVED IN: chromosome segregation, cell division; LOCATED IN: chromosome, centromeric region, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Centromere protein Cenp-O (InterPro:IPR018464); Has 43 Blast hits to 43 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
    NP_568235.1
    • INVOLVED IN: chromosome segregation, cell division; LOCATED IN: chromosome, centromeric region, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Centromere protein Cenp-O (InterPro:IPR018464); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      3378956..3382958
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001343133.1 → NP_001318533.1  centromere protein O [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4KI95
      Conserved Domains (1) summary
      pfam09496
      Location:106 → 229
      CENP-O; Cenp-O kinetochore centromere component

    2. NM_121109.3 → NP_568235.1  centromere protein O [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568235.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2FDR2, Q8GUP4, Q9C5F7
      Conserved Domains (1) summary
      pfam09496
      Location:106 → 306
      CENP-O; Cenp-O kinetochore centromere component

    3. NM_001203356.1 → NP_001190285.1  centromere protein O [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190285.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4KI97, Q9C5F7
      Conserved Domains (1) summary
      pfam09496
      Location:92 → 292
      CENP-O; Cenp-O kinetochore centromere component
    Nucleotide Protein
    Heading Accession and Version

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