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    AT4G37190 plasma membrane, autoregulation-binding site, misato segment II, myosin-like, tubulin/FtsZ protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829873, updated on 15-Feb-2024

    Summary

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    Gene symbol
    AT4G37190
    Gene description
    plasma membrane, autoregulation-binding site, misato segment II, myosin-like, tubulin/FtsZ protein
    Primary source
    Araport:AT4G37190
    Locus tag
    AT4G37190
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AP22.7; AP22_7
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    8
    Sequence:
    Chromosome: 4; NC_003075.7 (17507004..17509747)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene tRNA-Glu Neighboring gene Homeodomain-like superfamily protein Neighboring gene Thioredoxin superfamily protein Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene Cold acclimation protein WCOR413 family

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase. Van Leene J, et al. Nat Plants, 2019 Mar. PMID 30833711
    2. A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. Jaquinod M, et al. Mol Cell Proteomics, 2007 Mar. PMID 17151019, Free PMC Article
    3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198
    4. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001036723.2
    NM_119882.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plant-type vacuole HDA PubMed 

    General protein information

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    Preferred Names
    plasma membrane, autoregulation-binding site, misato segment II, myosin-like, tubulin/FtsZ protein
    NP_001031800.1
    • LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Misato Segment II, myosin-like (InterPro:IPR019605), Tubulin/FtsZ, N-terminal (InterPro:IPR019746); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_195436.1
    • LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta tubulin, autoregulation binding site (InterPro:IPR013838), Misato Segment II, myosin-like (InterPro:IPR019605), Tubulin/FtsZ, N-terminal (InterPro:IPR019746); Has 345 Blast hits to 341 proteins in 161 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi - 140; Plants - 55; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      17507004..17509747
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119882.3 → NP_195436.1  plasma membrane, autoregulation-binding site, misato segment II, myosin-like, tubulin/FtsZ protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195436.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FWA6, A0A7G2F3J1, O23167, Q0WMY3
      Conserved Domains (1) summary
      cd06060
      Location:2 → 544
      misato; Misato segment II tubulin-like domain

    2. NM_001036723.2 → NP_001031800.1  plasma membrane, autoregulation-binding site, misato segment II, myosin-like, tubulin/FtsZ protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031800.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2F3J1, B9DFJ9, Q0WMY3
      Conserved Domains (1) summary
      cd06060
      Location:2 → 498
      misato; Misato segment II tubulin-like domain
    Nucleotide Protein
    Heading Accession and Version

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