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    AT4G19900 alpha 1,4-glycosyltransferase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827735, updated on 15-Oct-2023

    Summary

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    Gene symbol
    AT4G19900
    Gene description
    alpha 1,4-glycosyltransferase family protein
    Primary source
    Araport:AT4G19900
    Locus tag
    AT4G19900
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F18F4.6; F18F4_6
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    5
    Sequence:
    Chromosome: 4; NC_003075.7 (10789091..10791618, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Glutathione S-transferase family protein Neighboring gene Pentatricopeptide repeat (PPR-like) superfamily protein Neighboring gene miscRNA Neighboring gene low-molecular-weight cysteine-rich 38

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001341377.1
    NM_118109.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    alpha 1,4-glycosyltransferase family protein
    NP_193724.2
    • alpha 1,4-glycosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, Golgi stack; EXPRESSED IN: flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Alpha 1,4-glycosyltransferase conserved region (InterPro:IPR007652), Glycosyltransferase, DXD sugar-binding region (InterPro:IPR007577); BEST Arabidopsis thaliana protein match is: alpha 1,4-glycosyltransferase family protein (TAIR:AT2G38152.1); Has 54113 Blast hits to 14510 proteins in 385 species: Archae - 4; Bacteria - 200; Metazoa - 877; Fungi - 767; Plants - 50641; Viruses - 0; Other Eukaryotes - 1624 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      10789091..10791618 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118109.3 → NP_193724.2  alpha 1,4-glycosyltransferase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193724.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P0C8Q4
      UniProtKB/TrEMBL
      A0A5S9XUF2, A0A654FR05, W8Q6J5
      Conserved Domains (2) summary
      pfam04488
      Location:384 → 503
      Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
      pfam04572
      Location:513 → 644
      Gb3_synth; Alpha 1,4-glycosyltransferase conserved region

    2. NM_001341377.1 → NP_001329702.1  alpha 1,4-glycosyltransferase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B8J0
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P0C8Q4.1

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