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    AT3G62920 zinc metalloproteinase aureolysin [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 825467, updated on 7-Sep-2023

    Summary

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    Gene symbol
    AT3G62920
    Gene description
    zinc metalloproteinase aureolysin
    Primary source
    Araport:AT3G62920
    Locus tag
    AT3G62920
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (23260597..23261297)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene CW-type Zinc Finger Neighboring gene Peptide chain release factor 1 Neighboring gene Thioredoxin superfamily protein Neighboring gene Cysteine proteinases superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis G-protein interactome reveals connections to cell wall carbohydrates and morphogenesis. Klopffleisch K, et al. Mol Syst Biol, 2011 Sep 27. PMID 21952135, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_116157.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    zinc metalloproteinase aureolysin
    NP_191851.1
    • unknown protein; Has 25 Blast hits to 25 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      23260597..23261297
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_116157.4 → NP_191851.1  zinc metalloproteinase aureolysin [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_191851.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VMJ1, A0A654FK71, Q9LYC9
    Nucleotide Protein
    Heading Accession and Version

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