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    AT3G19970 alpha/beta-Hydrolases superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821535, updated on 15-Feb-2024

    Summary

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    Gene symbol
    AT3G19970
    Gene description
    alpha/beta-Hydrolases superfamily protein
    Primary source
    Araport:AT3G19970
    Locus tag
    AT3G19970
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    5
    Sequence:
    Chromosome: 3; NC_003074.8 (6958509..6961684)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene RING/U-box superfamily protein Neighboring gene myosin 1 Neighboring gene flower-specific, phytochrome-associated protein phosphatase 3 Neighboring gene E3 ubiquitin-protein ligase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713
    2. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001338434.1
    NM_001338435.1
    NM_001338436.1
    NM_001338437.1
    NM_112887.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    alpha/beta-Hydrolases superfamily protein
    NP_566652.1
    • alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF829, transmembrane 53 (InterPro:IPR008547); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G18245.1); Has 401 Blast hits to 400 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 180; Fungi - 77; Plants - 116; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      6958509..6961684
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112887.3 → NP_566652.1  alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566652.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VGS4, A0A384LL71, Q9LHE8
      Conserved Domains (1) summary
      pfam05705
      Location:163 → 422
      DUF829; Eukaryotic protein of unknown function (DUF829)

    2. NM_001338434.1 → NP_001327016.1  alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VGS4, A0A384LL71, Q9LHE8
      Conserved Domains (1) summary
      pfam05705
      Location:163 → 422
      DUF829; Eukaryotic protein of unknown function (DUF829)

    3. NM_001338435.1 → NP_001327013.1  alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VGS4, A0A384LL71, Q9LHE8
      Conserved Domains (1) summary
      pfam05705
      Location:163 → 422
      DUF829; Eukaryotic protein of unknown function (DUF829)

    4. NM_001338436.1 → NP_001327014.1  alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VGS4, A0A384LL71, Q9LHE8
      Conserved Domains (1) summary
      pfam05705
      Location:163 → 422
      DUF829; Eukaryotic protein of unknown function (DUF829)

    5. NM_001338437.1 → NP_001327015.1  alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VGS4, A0A384LL71, Q9LHE8
      Conserved Domains (1) summary
      pfam05705
      Location:163 → 422
      DUF829; Eukaryotic protein of unknown function (DUF829)
    Nucleotide Protein
    Heading Accession and Version

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