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    AT2G23390 acyl-CoA [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816871, updated on 15-Feb-2024

    Summary

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    Gene symbol
    AT2G23390
    Gene description
    acyl-CoA
    Primary source
    Araport:AT2G23390
    Locus tag
    AT2G23390
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F26B6.4; F26B6_4
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    10
    Sequence:
    Chromosome: 2; NC_003071.7 (9960365..9963646, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene poly(A) binding protein 4 Neighboring gene filament-like protein (DUF869) Neighboring gene cyclin delta-3 Neighboring gene SET domain-containing protein Neighboring gene Undecaprenyl pyrophosphate synthetase family protein Neighboring gene cis-prenyltransferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197
    2. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_127903.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    acyl-CoA
    NP_179920.1
    • CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF482 (InterPro:IPR007434), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 2165 Blast hits to 2163 proteins in 543 species: Archae - 0; Bacteria - 1044; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 1088 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      9960365..9963646 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001335848.1 → NP_001323779.1  acyl-CoA [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AY18

    2. NM_127903.5 → NP_179920.1  acyl-CoA [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179920.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W2B7, A0A7G2EAJ4, O80456
      Conserved Domains (1) summary
      pfam04339
      Location:89 → 466
      FemAB_like; Peptidogalycan biosysnthesis/recognition
    Nucleotide Protein
    Heading Accession and Version

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