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    SPBC1198.01 putative glutathione-dependent formaldehyde dehydrogenase [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2540059, updated on 13-Mar-2024

    Summary

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    Gene symbol
    SPBC1198.01
    Gene description
    putative glutathione-dependent formaldehyde dehydrogenase
    Primary source
    PomBase:SPBC1198.01
    Locus tag
    SPBC1198.01
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    Location:
    chromosome: II
    Exon count:
    1
    Sequence:
    Chromosome: II; NC_003423.3 (172378..174315)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene putative isocitrate lyase Neighboring gene putative nicotinic acid plasma membrane transporter Neighboring gene putative transcription factor Cha4 Neighboring gene miscRNA Neighboring gene golgin subfamily A protein Neighboring gene adenine deaminase Dea2 Neighboring gene miscRNA Neighboring gene putative zinc finger domain-containing transcription factor Zas1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Nitric oxide signaling and its role in oxidative stress response in Schizosaccharomyces pombe. Astuti RI, et al. Nitric Oxide, 2016 Jan 30. PMID 26645666
    2. Expanded Interactome of the Intrinsically Disordered Protein Dss1. Schenstrøm SM, et al. Cell Rep, 2018 Oct 23. PMID 30355493, Free PMC Article
    3. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
    4. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
    5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in cellular detoxification of nitrogen compound IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in cellular response to nitrosative stress IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in Golgi apparatus HDA PubMed 

    General protein information

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    Preferred Names
    putative glutathione-dependent formaldehyde dehydrogenase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      172378..174315
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001020976.2 → NP_595070.1  putative glutathione-dependent formaldehyde dehydrogenase [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_595070.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9P6I8
      Conserved Domains (2) summary
      cd08283
      Location:37 → 421
      FDH_like_1; Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1
      COG1063
      Location:37 → 417
      Tdh; Threonine dehydrogenase or related Zn-dependent dehydrogenase [Amino acid transport and metabolism, General function prediction only]
    Nucleotide Protein
    Heading Accession and Version

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