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    LOC100241014 probable sugar phosphate/phosphate translocator At3g11320-like [ Vitis vinifera (wine grape) ]

    Gene ID: 100241014, updated on 23-Oct-2023

    Summary

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    Gene symbol
    LOC100241014
    Gene description
    probable sugar phosphate/phosphate translocator At3g11320-like
    Locus tag
    VIT_00016383001
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Vitis vinifera
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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    Genomic context

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    Location:
    chromosome: 13
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 13 NC_081817.1 (4409973..4416981)
    102 previous assembly 12X (GCF_000003745.3) 13 NC_012019.3 (4328362..4335361)

    Chromosome 13 - NC_081817.1Genomic Context describing neighboring genes Neighboring gene O-fucosyltransferase 19 Neighboring gene large ribosomal subunit protein eL33w Neighboring gene LIM domain-containing protein WLIM2b Neighboring gene pentatricopeptide repeat-containing protein At2g21090-like Neighboring gene uncharacterized protein At2g39910

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A high quality draft consensus sequence of the genome of a heterozygous grapevine variety. Velasco R, et al. PLoS One, 2007 Dec 19. PMID 18094749, Free PMC Article
    2. De novo transcriptome characterization of Vitis vinifera cv. Corvina unveils varietal diversity. Venturini L, et al. BMC Genomics, 2013 Jan 18. PMID 23331995, Free PMC Article
    3. The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Jaillon O, et al. Nature, 2007 Sep 27. PMID 17721507

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables antiporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable sugar phosphate/phosphate translocator At3g11320

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3070453v1 Primary Assembly

    Genomic

    1. NC_081817.1 Reference ASM3070453v1 Primary Assembly

      Range
      4409973..4416981
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002279951.4 → XP_002279987.1  probable sugar phosphate/phosphate translocator At3g11320

      See identical proteins and their annotated locations for XP_002279987.1

      UniProtKB/TrEMBL
      A0A438FLF3, A5BSA8
      Conserved Domains (1) summary
      cl26744
      Location:12 → 299
      TPT; Triose-phosphate Transporter family
    Nucleotide Protein
    Heading Accession and Version

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