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    LOC542448 embryo surrounding region 2 [ Zea mays ]

    Gene ID: 542448, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC542448
    Gene description
    embryo surrounding region 2
    Locus tag
    ZEAMMB73_Zm00001d027819
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
    Also known as
    ESR1; esr2; ESR2B; ESR1c1; ESR1g1; ESR1g2; ESR2c1; ZmESR1; ZmESR2; GRMZM2G315601
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 1 NC_050096.1 (14342856..14343428)
    102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 1 NC_024459.2 (14447955..14448527)

    Chromosome 1 - NC_050096.1Genomic Context describing neighboring genes Neighboring gene IQ domain-containing protein IQM5 Neighboring gene uncharacterized LOC107548105 Neighboring gene embryo surrounding region 1 Neighboring gene CLAVATA3/ESR (CLE)-related protein ESR1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. CLE peptide signaling during plant development. Wang G, et al. Protoplasma, 2010 Apr. PMID 20016993, Free PMC Article
    2. The CLE family of plant polypeptide signaling molecules. Jun JH, et al. Cell Mol Life Sci, 2008 Mar. PMID 18034320
    3. Esr genes show different levels of expression in the same region of maize endosperm. Bonello JF, et al. Gene, 2000 Apr 4. PMID 10767543
    4. ZmEsr, a novel endosperm-specific gene expressed in a restricted region around the maize embryo. Opsahl-Ferstad HG, et al. Plant J, 1997 Jul. PMID 9263463
    5. Annotation and expression profile analysis of 2073 full-length cDNAs from stress-induced maize (Zea mays L.) seedlings. Jia J, et al. Plant J, 2006 Dec. PMID 17076806

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables receptor serine/threonine kinase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    CLAVATA3/ESR (CLE)-related protein 2-B
    Names
    CLAVATA3/ESR (CLE)-related protein ESR1
    CLAVATA3/ESR (CLE)-related protein ESR2
    ESR2c1 proteinSR2g2 protein
    Embryo surrounding region protein 1
    Embryo surrounding region protein 2
    Embryo surrounding region protein 2-B
    Esr2g1
    Esr2g2
    PCO067764

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001328050.2 → NP_001314979.2  CLAVATA3/ESR (CLE)-related protein 2-B precursor

      Status: VALIDATED

      Source sequence(s)
      EU954242
      UniProtKB/Swiss-Prot
      B6SNC7, O24618
      UniProtKB/TrEMBL
      A0A1D6JPZ1, A0A317YFD1, A0A8J8Y5V6

    RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Genomic

    1. NC_050096.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

      Range
      14342856..14343428
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001112006.1: Suppressed sequence

      Description
      NM_001112006.1: This RefSeq was removed because currently there is support for the transcript but not for the protein.

    2. NM_001149274.1: Suppressed sequence

      Description
      NM_001149274.1: This RefSeq was removed because currently there is support for the transcript but not for the protein.
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O24565.1 GenPept UniProtKB/Swiss-Prot:O24565
    O24602.1 GenPept UniProtKB/Swiss-Prot:O24602
    O24618.1 GenPept UniProtKB/Swiss-Prot:O24618

    Gene LinkOut

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