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    Gm5149 predicted gene 5149 [ Mus musculus (house mouse) ]

    Gene ID: 381483, updated on 8-Feb-2024

    Summary

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    Official Symbol
    Gm5149provided by MGI
    Official Full Name
    predicted gene 5149provided by MGI
    Primary source
    MGI:MGI:3648405
    See related
    AllianceGenome:MGI:3648405
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm42649; EG381483
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    Location:
    3 H3; 3
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (149037883..149046274)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (149332246..149340637)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene adhesion G protein-coupled receptor L2 Neighboring gene STARR-seq mESC enhancer starr_09265 Neighboring gene STARR-positive B cell enhancer ABC_E337 Neighboring gene predicted gene 1653 Neighboring gene STARR-positive B cell enhancer mm9_chr3:149002145-149002445 Neighboring gene predicted gene, 57703 Neighboring gene predicted gene, 26468 Neighboring gene STARR-positive B cell enhancer mm9_chr3:149073444-149073744 Neighboring gene RIKEN cDNA A630039O03 gene Neighboring gene STARR-positive B cell enhancer mm9_chr3:149108487-149108788 Neighboring gene STARR-seq mESC enhancer starr_09268 Neighboring gene STARR-seq mESC enhancer starr_09269

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      149037883..149046274
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_003954586.1 RNA Sequence

    2. XR_376228.3 RNA Sequence

    3. XR_003954585.1 RNA Sequence

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001033772.2: Suppressed sequence

      Description
      NM_001033772.2: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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