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    CENPVL1 centromere protein V like 1 [ Homo sapiens (human) ]

    Gene ID: 389857, updated on 5-Mar-2024

    Summary

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    Official Symbol
    CENPVL1provided by HGNC
    Official Full Name
    centromere protein V like 1provided by HGNC
    Primary source
    HGNC:HGNC:31851
    See related
    Ensembl:ENSG00000223591 AllianceGenome:HGNC:31851
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    PRR6L1; CENPVP1
    Summary
    Predicted to enable carbon-sulfur lyase activity and metal ion binding activity. [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    all
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    Genomic context

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    Location:
    Xp11.22
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (51710512..51712131)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (50982164..50983783)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (51453608..51455227)

    Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105373205 Neighboring gene centromere protein V like 2 Neighboring gene G1 to S phase transition 2 Neighboring gene MAGE family member D1 Neighboring gene zinc finger protein 852 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Improving GENCODE reference gene annotation using a high-stringency proteogenomics workflow. Wright JC, et al. Nat Commun, 2016 Jun 2. PMID 27250503, Free PMC Article
    2. The STUbL RNF4 regulates protein group SUMOylation by targeting the SUMO conjugation machinery. Kumar R, et al. Nat Commun, 2017 Nov 27. PMID 29180619, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    Genotypes

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables carbon-sulfur lyase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    centromere protein V-like protein 1
    Names
    proline rich 6-like 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001355277.1 → NP_001342206.1  centromere protein V-like protein 1

      Status: VALIDATED

      Source sequence(s)
      AC234030
      Consensus CDS
      CCDS87745.1
      UniProtKB/Swiss-Prot
      A0A0U1RR11, P0DPI3, Q3ZM64
      Related
      ENSP00000489273.1, ENST00000602548.2
      Conserved Domains (1) summary
      COG3791
      Location:133 → 228
      COG3791; Uncharacterized conserved protein [Function unknown]

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

      Range
      51710512..51712131
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060947.1 Alternate T2T-CHM13v2.0

      Range
      50982164..50983783
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A0U1RR11.1 GenPept UniProtKB/Swiss-Prot:A0A0U1RR11

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials