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    LOC102724728 POM121 transmembrane nucleoporin pseudogene [ Homo sapiens (human) ]

    Gene ID: 102724728, updated on 10-Oct-2023

    Summary

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    Gene symbol
    LOC102724728
    Gene description
    POM121 transmembrane nucleoporin pseudogene
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    Location:
    22q11.21
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (18846548..18848429)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (19221606..19223487)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (21480428..21482309, complement)

    Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene gamma-glutamyltransferase 3 pseudogene Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr22:18784852-18785463 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:18790287-18790788 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:18790789-18791288 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:18808119-18808632 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:18808633-18809148 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:18809149-18809662 Neighboring gene OCT4-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:18809663-18810176 Neighboring gene OCT4-H3K4me1 hESC enhancer GRCh37_chr22:18810177-18810690 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:18811010-18811514 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:18812019-18812522 Neighboring gene E2F transcription factor 6 pseudogene 1 Neighboring gene POM121 transmembrane nucleoporin like 15, pseudogene Neighboring gene BCR pseudogene 7 Neighboring gene family with sequence similarity 230 member F Neighboring gene OCT4 hESC enhancer GRCh37_chr22:18883553-18884054

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    Genotypes

    General gene information

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    Other Names

    • putative POM121-like protein 1

    Clone Names

    • FLJ60978

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_136575.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AK302597

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

      Range
      18846548..18848429
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060946.1 Alternate T2T-CHM13v2.0

      Range
      19221606..19223487
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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