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    KIF20A kinesin family member 20A [ Sus scrofa (pig) ]

    Gene ID: 100515193, updated on 17-Aug-2024

    Summary

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    Official Symbol
    KIF20Aprovided by VGNC
    Official Full Name
    kinesin family member 20Aprovided by VGNC
    Primary source
    VGNC:VGNC:89462
    See related
    Ensembl:ENSSSCG00000014326
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
    Expression
    Ubiquitous expression in ovary (RPKM 6.4), spleen (RPKM 6.0) and 8 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 2 NC_010444.4 (140202316..140213144)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 2 NC_010444.3 (145901017..145910033)

    Chromosome 2 - NC_010444.4Genomic Context describing neighboring genes Neighboring gene bromodomain-containing protein 8-like Neighboring gene bromodomain containing 8 Neighboring gene cell division cycle 23 Neighboring gene GDNF family receptor alpha 3 Neighboring gene cell division cycle 25C

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    Bibliography

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    Related articles in PubMed

    1. PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. Uenishi H, et al. Nucleic Acids Res, 2007 Jan. PMID 17145712, Free PMC Article
    2. PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Uenishi H, et al. Nucleic Acids Res, 2004 Jan 1. PMID 14681463, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables plus-end-directed microtubule motor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in microtubule-based movement IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic spindle assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of kinesin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in spindle microtubule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    kinesin-like protein KIF20A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010444.4 Reference Sscrofa11.1 Primary Assembly

      Range
      140202316..140213144
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021084835.1 → XP_020940494.1  kinesin-like protein KIF20A isoform X1

      UniProtKB/TrEMBL
      A0A8D0U0E8, A0A8D1S8U5
      Conserved Domains (2) summary
      cd01368
      Location:63 → 505
      KISc_KIF23_like; Kinesin motor domain, KIF23-like subgroup
      cl25732
      Location:556 → 739
      SMC_N; RecF/RecN/SMC N terminal domain

    2. XM_003123952.6 → XP_003124000.3  kinesin-like protein KIF20A isoform X2

      See identical proteins and their annotated locations for XP_003124000.3

      UniProtKB/TrEMBL
      A0A480JET8, A0A4X1V2Q7, A0A8D0WNP5, A0A8D1SCN7
      Related
      ENSSSCP00000053967.1, ENSSSCT00000065298.2
      Conserved Domains (3) summary
      cd01368
      Location:63 → 505
      KISc_KIF23_like; Kinesin motor domain, KIF23-like subgroup
      pfam00225
      Location:70 → 506
      Kinesin; Kinesin motor domain
      cl02488
      Location:547 → 718
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...

    3. XM_013995157.2 → XP_013850611.1  kinesin-like protein KIF20A isoform X3

      UniProtKB/TrEMBL
      A0A8D1SCN7
      Related
      ENSSSCP00000068176.1, ENSSSCT00000070800.1
      Conserved Domains (3) summary
      cd01368
      Location:63 → 505
      KISc_KIF23_like; Kinesin motor domain, KIF23-like subgroup
      pfam00225
      Location:70 → 506
      Kinesin; Kinesin motor domain
      cl02488
      Location:539 → 710
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    Nucleotide Protein
    Heading Accession and Version

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