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    LOC100355886 signal recognition particle 54 kDa protein [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100355886, updated on 3-Apr-2024

    Summary

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    Gene symbol
    LOC100355886
    Gene description
    signal recognition particle 54 kDa protein
    See related
    Ensembl:ENSOCUG00000005763
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Also known as
    SRP54; FAM177A1
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    Genomic context

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    Location:
    chromosome: 17
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 17 NC_067390.1 (55592501..55677686)

    Chromosome 17 - NC_067390.1Genomic Context describing neighboring genes Neighboring gene non-histone chromosomal protein HMG-14-like Neighboring gene bromodomain adjacent to zinc finger domain 1A Neighboring gene uncharacterized LOC100355643 Neighboring gene protein phosphatase 2 regulatory subunit B''gamma Neighboring gene protein only RNase P catalytic subunit Neighboring gene uncharacterized LOC127483707

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067390.1 Chromosome 17 Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Bat3 promotes the membrane integration of tail-anchored proteins. Leznicki P, et al. J Cell Sci, 2010 Jul 1. PMID 20516149, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 7S RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables endoplasmic reticulum signal peptide binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in SRP-dependent cotranslational protein targeting to membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in SRP-dependent cotranslational protein targeting to membrane, translocation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of signal recognition particle, endoplasmic reticulum targeting IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein FAM177A1; signal recognition particle 54 kDa protein
    Names
    family with sequence similarity 177 member A1
    signal recognition particle 54kDa

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NC_067390.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      55592501..55677686
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_051822173.1 → XP_051678133.1  signal recognition particle 54 kDa protein isoform X5

    2. XM_051822170.1 → XP_051678130.1  signal recognition particle 54 kDa protein isoform X1

    3. XM_051822172.1 → XP_051678132.1  signal recognition particle 54 kDa protein isoform X2

    4. XM_051822171.1 → XP_051678131.1  signal recognition particle 54 kDa protein isoform X1

    5. XM_008269493.3 → XP_008267715.1  protein FAM177A1 isoform X4

      See identical proteins and their annotated locations for XP_008267715.1

      UniProtKB/TrEMBL
      G1SPL3
      Conserved Domains (1) summary
      pfam14774
      Location:41 → 142
      FAM177; FAM177 family

    6. XM_002718139.4 → XP_002718185.1  protein FAM177A1 isoform X3

      Conserved Domains (1) summary
      pfam14774
      Location:62 → 163
      FAM177; FAM177 family

    7. XM_008269492.3 → XP_008267714.1  protein FAM177A1 isoform X4

      See identical proteins and their annotated locations for XP_008267714.1

      UniProtKB/TrEMBL
      G1SPL3
      Related
      ENSOCUP00000004990.3
      Conserved Domains (1) summary
      pfam14774
      Location:41 → 142
      FAM177; FAM177 family
    Nucleotide Protein
    Heading Accession and Version

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