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    COLEC11 collectin subfamily member 11 [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100345974, updated on 8-Mar-2024

    Summary

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    Gene symbol
    COLEC11
    Gene description
    collectin subfamily member 11
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: Un
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) Unplaced Scaffold NW_026259170.1 (5514892..5559544, complement)

    NW_026259170.1Genomic Context describing neighboring genes Neighboring gene doublecortin domain containing 2C Neighboring gene allantoicase Neighboring gene uncharacterized LOC127487510 Neighboring gene ribosomal protein S7 Neighboring gene ribonuclease H1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_026259170 Unplaced Scaffold Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    collectin-11
    Names
    collectin sub-family member 11

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NW_026259170.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      5514892..5559544 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_051833286.1 → XP_051689246.1  collectin-11 isoform X3

    2. XM_017350634.2 → XP_017206123.1  collectin-11 isoform X1

      Conserved Domains (2) summary
      cd03591
      Location:157 → 272
      CLECT_collectin_like; C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1)
      pfam01391
      Location:41 → 98
      Collagen; Collagen triple helix repeat (20 copies)

    3. XM_051833287.1 → XP_051689247.1  collectin-11 isoform X4

    4. XM_051833285.1 → XP_051689245.1  collectin-11 isoform X2

    5. XM_008274556.3 → XP_008272778.1  collectin-11 isoform X5

      Conserved Domains (2) summary
      cd03591
      Location:168 → 283
      CLECT_collectin_like; C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1)
      pfam01391
      Location:52 → 109
      Collagen; Collagen triple helix repeat (20 copies)
    Nucleotide Protein
    Heading Accession and Version

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