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    AT2G01220 Nucleotidylyl transferase superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 814650, updated on 15-Feb-2024

    Summary

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    Gene symbol
    AT2G01220
    Gene description
    Nucleotidylyl transferase superfamily protein
    Primary source
    Araport:AT2G01220
    Locus tag
    AT2G01220
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AT2G01230; F10A8.10; F10A8_10
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    Genomic context

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    See AT2G01220 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    12
    Sequence:
    Chromosome: 2; NC_003071.7 (123023..126611)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Octicosapeptide/Phox/Bem1p family protein Neighboring gene indole-3-acetic acid inducible 32 Neighboring gene Leucine-rich repeat protein kinase family protein Neighboring gene ncRNA Neighboring gene reticulon-like protein B15 Neighboring gene Ribosomal protein L30/L7 family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. Froehlich JE, et al. J Proteome Res, 2003 Jul-Aug. PMID 12938931
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197
    3. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_126183.2
    NM_179589.4

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    involved_in biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast envelope HDA PubMed 

    General protein information

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    Preferred Names
    Nucleotidylyl transferase superfamily protein
    NP_178231.2
    • Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.2); Has 432 Blast hits to 425 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 78; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink).
    NP_849920.1
    • Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.1); Has 429 Blast hits to 422 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 76; Viruses - 0; Other Eukaryotes - 310 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      123023..126611
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_179589.4 → NP_849920.1  Nucleotidylyl transferase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849920.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VYM8, A0A7G2E4M1, Q8GX51, Q8L845
      Conserved Domains (1) summary
      cl00015
      Location:217 → 382
      nt_trans; nucleotidyl transferase superfamily

    2. NM_126183.2 → NP_178231.2  Nucleotidylyl transferase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_178231.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4IM97, Q8LFF6
      Conserved Domains (2) summary
      cl00015
      Location:216 → 381
      nt_trans; nucleotidyl transferase superfamily
      cl00666
      Location:25 → 102
      CinA; Competence-damaged protein
    Nucleotide Protein
    Heading Accession and Version

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