U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    AT1G19025 DNA repair metallo-beta-lactamase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838484, updated on 7-Sep-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    AT1G19025
    Gene description
    DNA repair metallo-beta-lactamase family protein
    Primary source
    Araport:AT1G19025
    Locus tag
    AT1G19025
    See related
    TAIR:AT1G19025
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See AT1G19025 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (6568674..6570939)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene myosin-binding protein, putative (Protein of unknown function, DUF593) Neighboring gene Homeodomain-like superfamily protein Neighboring gene uncharacterized protein Neighboring gene CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase Neighboring gene pseudo Neighboring gene NAC (No Apical Meristem) domain transcriptional regulator superfamily protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    NM_001332383.1
    NM_101760.2

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    DNA repair metallo-beta-lactamase family protein
    NP_564070.1
    • DNA repair metallo-beta-lactamase family protein; CONTAINS InterPro DOMAIN/s: DNA repair metallo-beta-lactamase (InterPro:IPR011084); BEST Arabidopsis thaliana protein match is: DNA repair metallo-beta-lactamase family protein (TAIR:AT1G27410.1); Has 1078 Blast hits to 1060 proteins in 342 species: Archae - 34; Bacteria - 280; Metazoa - 259; Fungi - 220; Plants - 166; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      6568674..6570939
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001332382.1 → NP_001321878.1  DNA repair metallo-beta-lactamase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ASD8, Q8LCG8

    2. NM_101760.2 → NP_564070.1  DNA repair metallo-beta-lactamase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564070.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654ED26, A0A7G2DXA4, F4IDZ7
      Conserved Domains (2) summary
      pfam07522
      Location:232 → 347
      DRMBL; DNA repair metallo-beta-lactamase
      cl23716
      Location:7 → 159
      metallo-hydrolase-like_MBL-fold; mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain

    3. NM_001332383.1 → NP_001321877.1  DNA repair metallo-beta-lactamase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ASA0
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools