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    ASG1 ATP-dependent DNA helicase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816944, updated on 15-Feb-2024

    Summary

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    Gene symbol
    ASG1
    Gene description
    ATP-dependent DNA helicase
    Primary source
    Araport:AT2G24100
    Locus tag
    AT2G24100
    See related
    TAIR:AT2G24100
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ALTERED SEED GERMINATION 1; F27D4.1; F27D4_1
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    Genomic context

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    See ASG1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    6
    Sequence:
    Chromosome: 2; NC_003071.7 (10244745..10246994)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene F-box protein (DUF295) Neighboring gene Ribosomal protein L35 Neighboring gene miscRNA Neighboring gene ncRNA Neighboring gene DNA/RNA polymerases superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197
    3. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_127972.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ATP-dependent DNA helicase
    NP_565562.2
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G30780.1); Has 101 Blast hits to 101 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      10244745..10246994
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127972.5 → NP_565562.2  ATP-dependent DNA helicase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565562.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VZP5, Q9ZUI1
    Nucleotide Protein
    Heading Accession and Version

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