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    LOC104814201 zinc finger protein CONSTANS-LIKE 15 [ Tarenaya hassleriana ]

    Gene ID: 104814201, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC104814201
    Gene description
    zinc finger protein CONSTANS-LIKE 15
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tarenaya hassleriana
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; New World clade; Tarenaya
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    Genomic context

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    See LOC104814201 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    101 current ASM46358v1 (GCF_000463585.1) Unplaced Scaffold NW_010965451.1 (479944..484056, complement)

    NW_010965451.1Genomic Context describing neighboring genes Neighboring gene delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal Neighboring gene glycerophosphodiester phosphodiesterase GDPD3 Neighboring gene uncharacterized LOC104814203 Neighboring gene uncharacterized LOC104814204

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_010965451.1 Unplaced Scaffold Reference ASM46358v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein CONSTANS-LIKE 15

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Tarenaya hassleriana Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM46358v1

    Genomic

    1. NW_010965451.1 Reference ASM46358v1

      Range
      479944..484056 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010542119.1 → XP_010540421.1  zinc finger protein CONSTANS-LIKE 15

      See identical proteins and their annotated locations for XP_010540421.1

      Conserved Domains (2) summary
      cd00021
      Location:15 → 57
      BBOX; B-Box-type zinc finger; zinc binding domain (CHC3H2); often present in combination with other motifs, like RING zinc finger, NHL motif, coiled-coil or RFP domain in functionally unrelated proteins, most likely mediating protein-protein interaction.
      pfam06203
      Location:386 → 429
      CCT; CCT motif

    2. XM_010542125.1 → XP_010540427.1  zinc finger protein CONSTANS-LIKE 15

      See identical proteins and their annotated locations for XP_010540427.1

      Conserved Domains (2) summary
      cd00021
      Location:15 → 57
      BBOX; B-Box-type zinc finger; zinc binding domain (CHC3H2); often present in combination with other motifs, like RING zinc finger, NHL motif, coiled-coil or RFP domain in functionally unrelated proteins, most likely mediating protein-protein interaction.
      pfam06203
      Location:386 → 429
      CCT; CCT motif

    3. XM_010542126.1 → XP_010540428.1  zinc finger protein CONSTANS-LIKE 15

      See identical proteins and their annotated locations for XP_010540428.1

      Conserved Domains (2) summary
      cd00021
      Location:15 → 57
      BBOX; B-Box-type zinc finger; zinc binding domain (CHC3H2); often present in combination with other motifs, like RING zinc finger, NHL motif, coiled-coil or RFP domain in functionally unrelated proteins, most likely mediating protein-protein interaction.
      pfam06203
      Location:386 → 429
      CCT; CCT motif

    4. XM_010542122.1 → XP_010540424.1  zinc finger protein CONSTANS-LIKE 15

      See identical proteins and their annotated locations for XP_010540424.1

      Conserved Domains (2) summary
      cd00021
      Location:15 → 57
      BBOX; B-Box-type zinc finger; zinc binding domain (CHC3H2); often present in combination with other motifs, like RING zinc finger, NHL motif, coiled-coil or RFP domain in functionally unrelated proteins, most likely mediating protein-protein interaction.
      pfam06203
      Location:386 → 429
      CCT; CCT motif

    5. XM_010542124.1 → XP_010540426.1  zinc finger protein CONSTANS-LIKE 15

      See identical proteins and their annotated locations for XP_010540426.1

      Conserved Domains (2) summary
      cd00021
      Location:15 → 57
      BBOX; B-Box-type zinc finger; zinc binding domain (CHC3H2); often present in combination with other motifs, like RING zinc finger, NHL motif, coiled-coil or RFP domain in functionally unrelated proteins, most likely mediating protein-protein interaction.
      pfam06203
      Location:386 → 429
      CCT; CCT motif

    6. XM_010542120.1 → XP_010540422.1  zinc finger protein CONSTANS-LIKE 15

      See identical proteins and their annotated locations for XP_010540422.1

      Conserved Domains (2) summary
      cd00021
      Location:15 → 57
      BBOX; B-Box-type zinc finger; zinc binding domain (CHC3H2); often present in combination with other motifs, like RING zinc finger, NHL motif, coiled-coil or RFP domain in functionally unrelated proteins, most likely mediating protein-protein interaction.
      pfam06203
      Location:386 → 429
      CCT; CCT motif

    7. XM_010542121.1 → XP_010540423.1  zinc finger protein CONSTANS-LIKE 15

      See identical proteins and their annotated locations for XP_010540423.1

      Conserved Domains (2) summary
      cd00021
      Location:15 → 57
      BBOX; B-Box-type zinc finger; zinc binding domain (CHC3H2); often present in combination with other motifs, like RING zinc finger, NHL motif, coiled-coil or RFP domain in functionally unrelated proteins, most likely mediating protein-protein interaction.
      pfam06203
      Location:386 → 429
      CCT; CCT motif

    8. XM_010542117.1 → XP_010540419.1  zinc finger protein CONSTANS-LIKE 15

      See identical proteins and their annotated locations for XP_010540419.1

      Conserved Domains (2) summary
      cd00021
      Location:15 → 57
      BBOX; B-Box-type zinc finger; zinc binding domain (CHC3H2); often present in combination with other motifs, like RING zinc finger, NHL motif, coiled-coil or RFP domain in functionally unrelated proteins, most likely mediating protein-protein interaction.
      pfam06203
      Location:386 → 429
      CCT; CCT motif

    9. XM_010542118.1 → XP_010540420.1  zinc finger protein CONSTANS-LIKE 15

      See identical proteins and their annotated locations for XP_010540420.1

      Conserved Domains (2) summary
      cd00021
      Location:15 → 57
      BBOX; B-Box-type zinc finger; zinc binding domain (CHC3H2); often present in combination with other motifs, like RING zinc finger, NHL motif, coiled-coil or RFP domain in functionally unrelated proteins, most likely mediating protein-protein interaction.
      pfam06203
      Location:386 → 429
      CCT; CCT motif
    Nucleotide Protein
    Heading Accession and Version

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