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    LOC104718995 transcription factor bHLH104 [ Camelina sativa (false flax) ]

    Gene ID: 104718995, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC104718995
    Gene description
    transcription factor bHLH104
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Camelina sativa
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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    Genomic context

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    See LOC104718995 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    101 current Cs (GCF_000633955.1) 10 NC_025694.1 (14908497..14910295, complement)

    Chromosome 10 - NC_025694.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104718994 Neighboring gene transfer RNA threonine (anticodon AGU) Neighboring gene protein ACCELERATED CELL DEATH 6-like Neighboring gene uncharacterized LOC104718997 Neighboring gene uncharacterized LOC104718996 Neighboring gene uncharacterized LOC104720386

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_025694.1 Chromosome 10 Reference Cs

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. De novo assembly and characterization of Camelina sativa transcriptome by paired-end sequencing. Liang C, et al. BMC Genomics, 2013 Mar 5. PMID 23496985, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular iron ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription factor bHLH104

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Camelina sativa Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cs

    Genomic

    1. NC_025694.1 Reference Cs

      Range
      14908497..14910295 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010436823.2 → XP_010435125.1  transcription factor bHLH104

      Conserved Domains (2) summary
      smart00353
      Location:137 → 186
      HLH; helix loop helix domain
      pfam12329
      Location:177 → 229
      TMF_DNA_bd; TATA element modulatory factor 1 DNA binding
    Nucleotide Protein
    Heading Accession and Version

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