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    LOC104592248 trihelix transcription factor ASIL2-like [ Nelumbo nucifera (sacred lotus) ]

    Gene ID: 104592248, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC104592248
    Gene description
    trihelix transcription factor ASIL2-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nelumbo nucifera
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Proteales; Nelumbonaceae; Nelumbo
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    Genomic context

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    See LOC104592248 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    101 current Chinese Lotus 1.1 (GCF_000365185.1) Unplaced Scaffold NW_010729080.1 (3982714..3987660, complement)

    NW_010729080.1Genomic Context describing neighboring genes Neighboring gene potassium channel KAT3 Neighboring gene uncharacterized LOC104592610 Neighboring gene uncharacterized LOC104592250 Neighboring gene MAR-binding filament-like protein 1-1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_010729080.1 Unplaced Scaffold Reference Chinese Lotus 1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription cis-regulatory region binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    trihelix transcription factor ASIL2-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Nelumbo nucifera Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Chinese Lotus 1.1 Primary Assembly

    Genomic

    1. NW_010729080.1 Reference Chinese Lotus 1.1 Primary Assembly

      Range
      3982714..3987660 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010251492.2 → XP_010249794.1  trihelix transcription factor ASIL2-like

      See identical proteins and their annotated locations for XP_010249794.1

      UniProtKB/TrEMBL
      A0A1U7ZNX8
      Conserved Domains (1) summary
      pfam13837
      Location:154 → 236
      Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain

    2. XM_019196849.1 → XP_019052394.1  trihelix transcription factor ASIL2-like

      UniProtKB/TrEMBL
      A0A1U7ZNX8

    3. XM_019196848.1 → XP_019052393.1  trihelix transcription factor ASIL2-like

      UniProtKB/TrEMBL
      A0A1U7ZNX8

    4. XM_010251499.2 → XP_010249801.1  trihelix transcription factor ASIL2-like

      See identical proteins and their annotated locations for XP_010249801.1

      UniProtKB/TrEMBL
      A0A1U7ZNX8
      Conserved Domains (1) summary
      pfam13837
      Location:154 → 236
      Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain

    5. XM_010251497.2 → XP_010249799.1  trihelix transcription factor ASIL2-like

      See identical proteins and their annotated locations for XP_010249799.1

      UniProtKB/TrEMBL
      A0A1U7ZNX8
      Conserved Domains (1) summary
      pfam13837
      Location:154 → 236
      Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain

    6. XM_010251498.2 → XP_010249800.1  trihelix transcription factor ASIL2-like

      See identical proteins and their annotated locations for XP_010249800.1

      UniProtKB/TrEMBL
      A0A1U7ZNX8
      Conserved Domains (1) summary
      pfam13837
      Location:154 → 236
      Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain

    7. XM_010251496.2 → XP_010249798.1  trihelix transcription factor ASIL2-like

      See identical proteins and their annotated locations for XP_010249798.1

      UniProtKB/TrEMBL
      A0A1U7ZNX8
      Conserved Domains (1) summary
      pfam13837
      Location:154 → 236
      Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain

    8. XM_010251494.2 → XP_010249796.1  trihelix transcription factor ASIL2-like

      See identical proteins and their annotated locations for XP_010249796.1

      UniProtKB/TrEMBL
      A0A1U7ZNX8
      Conserved Domains (1) summary
      pfam13837
      Location:154 → 236
      Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain

    9. XM_010251495.2 → XP_010249797.1  trihelix transcription factor ASIL2-like

      See identical proteins and their annotated locations for XP_010249797.1

      UniProtKB/TrEMBL
      A0A1U7ZNX8
      Conserved Domains (1) summary
      pfam13837
      Location:154 → 236
      Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain

    10. XM_010251489.2 → XP_010249791.1  trihelix transcription factor ASIL2-like

      See identical proteins and their annotated locations for XP_010249791.1

      UniProtKB/TrEMBL
      A0A1U7ZNX8
      Conserved Domains (1) summary
      pfam13837
      Location:154 → 236
      Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain

    11. XM_010251493.2 → XP_010249795.1  trihelix transcription factor ASIL2-like

      See identical proteins and their annotated locations for XP_010249795.1

      UniProtKB/TrEMBL
      A0A1U7ZNX8
      Conserved Domains (1) summary
      pfam13837
      Location:154 → 236
      Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain

    12. XM_010251491.2 → XP_010249793.1  trihelix transcription factor ASIL2-like

      See identical proteins and their annotated locations for XP_010249793.1

      UniProtKB/TrEMBL
      A0A1U7ZNX8
      Conserved Domains (1) summary
      pfam13837
      Location:154 → 236
      Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain

    13. XM_019196850.1 → XP_019052395.1  trihelix transcription factor ASIL2-like

      UniProtKB/TrEMBL
      A0A1U7ZNX8

    14. XM_010251490.2 → XP_010249792.1  trihelix transcription factor ASIL2-like

      See identical proteins and their annotated locations for XP_010249792.1

      UniProtKB/TrEMBL
      A0A1U7ZNX8
      Conserved Domains (1) summary
      pfam13837
      Location:154 → 236
      Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain

    15. XM_019196847.1 → XP_019052392.1  trihelix transcription factor ASIL2-like

      UniProtKB/TrEMBL
      A0A1U7ZNX8
    Nucleotide Protein
    Heading Accession and Version

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