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    cyth2 cytohesin 2 [ Danio rerio (zebrafish) ]

    Gene ID: 569358, updated on 25-Apr-2024

    Summary

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    Official Symbol
    cyth2provided by ZNC
    Official Full Name
    cytohesin 2provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-100921-55
    See related
    Ensembl:ENSDARG00000028800 AllianceGenome:ZFIN:ZDB-GENE-100921-55
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    si:dkey-283b15.4
    Summary
    Predicted to act upstream of or within regulation of ARF protein signal transduction. Orthologous to human CYTH2 (cytohesin 2). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    all
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    Genomic context

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    See cyth2 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 16 NC_007127.7 (5612550..5636474)
    105 previous assembly GRCz10 (GCF_000002035.5) 16 NC_007127.6 (5712908..5737502)

    Chromosome 16 - NC_007127.7Genomic Context describing neighboring genes Neighboring gene microtubule actin crosslinking factor 1b Neighboring gene solute carrier family 52 member 3-2b Neighboring gene si:dkey-283b15.2 Neighboring gene zgc:158689

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables guanyl-nucleotide exchange factor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within regulation of ARF protein signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cell projection IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    cytohesin-2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007127.7 Reference GRCz11 Primary Assembly

      Range
      5612550..5636474
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005157846.4 → XP_005157903.1  cytohesin-2

      UniProtKB/TrEMBL
      A0A8M2B4T7, E7F1N2
      Related
      ENSDARP00000117649.1, ENSDART00000140226.2
      Conserved Domains (3) summary
      cd01252
      Location:275 → 394
      PH_GRP1-like; General Receptor for Phosphoinositides-1-like Pleckstrin homology (PH) domain
      pfam00169
      Location:279 → 392
      PH; PH domain
      pfam01369
      Location:78 → 260
      Sec7; Sec7 domain
    Nucleotide Protein Strain
    Heading Accession and Version

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