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    CPS1 carbamoyl-phosphate synthase 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 488506, updated on 5-Mar-2024

    Summary

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    Official Symbol
    CPS1provided by VGNC
    Official Full Name
    carbamoyl-phosphate synthase 1provided by VGNC
    Primary source
    VGNC:VGNC:39572
    See related
    Ensembl:ENSCAFG00845017752
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See CPS1 in Genome Data Viewer
    Location:
    chromosome: 37
    Exon count:
    38
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 37 NC_051841.1 (18246433..18366577)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 37 NC_006619.4 (19188984..19309290)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 37 NC_049258.1 (18175864..18296018)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 37 NC_049297.1 (18198783..18319066)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 37 NC_049778.1 (18161084..18281176)

    Chromosome 37 - NC_051841.1Genomic Context describing neighboring genes Neighboring gene myosin light chain 1 Neighboring gene uncharacterized LOC119867951 Neighboring gene LanC like glutathione S-transferase 1 Neighboring gene uncharacterized LOC111094339 Neighboring gene heterogeneous nuclear ribonucleoprotein H-like Neighboring gene 60 kDa heat shock protein, mitochondrial-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in 'de novo' pyrimidine nucleobase biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in arginine biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in glutamine metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of carbamoyl-phosphate synthase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    carbamoyl-phosphate synthase [ammonia], mitochondrial
    Names
    carbamoyl-phosphate synthetase 1, mitochondrial
    XP_038303775.1
    XP_038377800.1
    XP_038441567.1
    XP_038505949.1
    XP_545627.2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051841.1 Reference ROS_Cfam_1.0

      Range
      18246433..18366577
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038447847.1 → XP_038303775.1  carbamoyl-phosphate synthase [ammonia], mitochondrial

      UniProtKB/TrEMBL
      A0A8C0LVT3, A0A8C0SJ79, A0A8C0SJY9, A0A8I3P552, A0A8I3P9N3
      Related
      ENSCAFP00845024805.1, ENSCAFT00845031688.1
      Conserved Domains (2) summary
      TIGR01368
      Location:46 → 400
      CPSaseIIsmall; carbamoyl-phosphate synthase, small subunit
      TIGR01369
      Location:419 → 1477
      CPSaseII_lrg; carbamoyl-phosphate synthase, large subunit

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049297.1 Alternate UMICH_Zoey_3.1

      Range
      18198783..18319066
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038521872.1 → XP_038377800.1  carbamoyl-phosphate synthase [ammonia], mitochondrial

      Conserved Domains (2) summary
      TIGR01368
      Location:46 → 400
      CPSaseIIsmall; carbamoyl-phosphate synthase, small subunit
      TIGR01369
      Location:419 → 1477
      CPSaseII_lrg; carbamoyl-phosphate synthase, large subunit

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049778.1 Alternate UNSW_CanFamBas_1.0

      Range
      18161084..18281176
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038650021.1 → XP_038505949.1  carbamoyl-phosphate synthase [ammonia], mitochondrial

      Conserved Domains (2) summary
      TIGR01368
      Location:46 → 400
      CPSaseIIsmall; carbamoyl-phosphate synthase, small subunit
      TIGR01369
      Location:419 → 1477
      CPSaseII_lrg; carbamoyl-phosphate synthase, large subunit

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049258.1 Alternate UU_Cfam_GSD_1.0

      Range
      18175864..18296018
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038585639.1 → XP_038441567.1  carbamoyl-phosphate synthase [ammonia], mitochondrial

      UniProtKB/TrEMBL
      A0A8C0LVT3, A0A8C0SJ79, A0A8C0SJY9, A0A8I3P552, A0A8I3P9N3
      Conserved Domains (2) summary
      TIGR01368
      Location:46 → 400
      CPSaseIIsmall; carbamoyl-phosphate synthase, small subunit
      TIGR01369
      Location:419 → 1477
      CPSaseII_lrg; carbamoyl-phosphate synthase, large subunit

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006619.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      19188984..19309290
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_545627.7 → XP_545627.2  carbamoyl-phosphate synthase [ammonia], mitochondrial

      UniProtKB/TrEMBL
      A0A8C0LVT3, A0A8C0SJ79, A0A8C0SJY9, A0A8I3P552, A0A8I3P9N3
      Conserved Domains (2) summary
      TIGR01368
      Location:46 → 400
      CPSaseIIsmall; carbamoyl-phosphate synthase, small subunit
      TIGR01369
      Location:419 → 1477
      CPSaseII_lrg; carbamoyl-phosphate synthase, large subunit
    Nucleotide Protein
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