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    BRF1 BRF1, RNA polymerase III transcription initiation factor 90 kDa subunit [ Gallus gallus (chicken) ]

    Gene ID: 423503, updated on 5-Mar-2024

    Summary

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    Symbol
    BRF1provided by CGNC
    Full Name
    BRF1, RNA polymerase III transcription initiation factor 90 kDa subunitprovided by CGNC
    Primary source
    CGNC:8895
    See related
    Ensembl:ENSGALG00010017110
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See BRF1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (52177064..52340401, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (52156106..52319191, complement)

    Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107053566 Neighboring gene uncharacterized LOC107053567 Neighboring gene uncharacterized LOC101751780 Neighboring gene uncharacterized LOC107053568 Neighboring gene BTB domain containing 6 Neighboring gene uncharacterized LOC121110833 Neighboring gene uncharacterized LOC107053569 Neighboring gene protein phosphatase 1 regulatory subunit 36

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA polymerase III general transcription initiation factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase III type 3 promoter sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables TBP-class protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA-templated transcription initiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transcription by RNA polymerase III IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transcription preinitiation complex assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of transcription factor TFIIIB complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of transcription preinitiation complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription factor IIIB 90 kDa subunit
    Names
    BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB
    BRF1, RNA polymerase III transcription initiation factor subunit

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      52177064..52340401 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_421405.8 → XP_421405.2  transcription factor IIIB 90 kDa subunit isoform X1

      UniProtKB/TrEMBL
      F1NQ85
      Related
      ENSGALP00010024181.1, ENSGALT00010041295.1
      Conserved Domains (2) summary
      COG1405
      Location:5 → 267
      SUA7; Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB [Transcription]
      pfam07741
      Location:455 → 552
      BRF1; Brf1-like TBP-binding domain

    2. XM_046941974.1 → XP_046797930.1  transcription factor IIIB 90 kDa subunit isoform X2

    3. XM_046941975.1 → XP_046797931.1  transcription factor IIIB 90 kDa subunit isoform X2

    4. XM_040701181.2 → XP_040557115.1  transcription factor IIIB 90 kDa subunit isoform X2

      Conserved Domains (1) summary
      COG1405
      Location:39 → 166
      SUA7; Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB [Transcription]

    5. XM_046941973.1 → XP_046797929.1  transcription factor IIIB 90 kDa subunit isoform X2

    6. XM_046941976.1 → XP_046797932.1  transcription factor IIIB 90 kDa subunit isoform X3

    7. XM_046941972.1 → XP_046797928.1  transcription factor IIIB 90 kDa subunit isoform X2

    8. XM_046941977.1 → XP_046797933.1  transcription factor IIIB 90 kDa subunit isoform X4

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      52156106..52319191 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040672078.2 → XP_040528012.1  transcription factor IIIB 90 kDa subunit isoform X1

      UniProtKB/TrEMBL
      F1NQ85
      Conserved Domains (2) summary
      COG1405
      Location:5 → 267
      SUA7; Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB [Transcription]
      pfam07741
      Location:455 → 552
      BRF1; Brf1-like TBP-binding domain

    2. XM_046919434.1 → XP_046775390.1  transcription factor IIIB 90 kDa subunit isoform X2

    3. XM_046919435.1 → XP_046775391.1  transcription factor IIIB 90 kDa subunit isoform X2

    4. XM_040672080.2 → XP_040528014.1  transcription factor IIIB 90 kDa subunit isoform X2

      Conserved Domains (1) summary
      COG1405
      Location:39 → 166
      SUA7; Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB [Transcription]

    5. XM_046919433.1 → XP_046775389.1  transcription factor IIIB 90 kDa subunit isoform X2

    6. XM_046919436.1 → XP_046775392.1  transcription factor IIIB 90 kDa subunit isoform X3

    7. XM_046919432.1 → XP_046775388.1  transcription factor IIIB 90 kDa subunit isoform X2

    Nucleotide Protein Strain
    Heading Accession and Version

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