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    RPL6 ribosomal protein L6 [ Gallus gallus (chicken) ]

    Gene ID: 373957, updated on 3-Apr-2024

    Summary

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    Official Symbol
    RPL6provided by CGNC
    Official Full Name
    ribosomal protein L6provided by CGNC
    Primary source
    CGNC:48978
    See related
    Ensembl:ENSGALG00010020685
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See RPL6 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 15 NC_052546.1 (6395368..6401507, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 15 NC_052587.1 (6408739..6412057, complement)

    Chromosome 15 - NC_052546.1Genomic Context describing neighboring genes Neighboring gene TRAF-type zinc finger domain containing 1 Neighboring gene HECT domain containing E3 ubiquitin protein ligase 4 Neighboring gene protein tyrosine phosphatase non-receptor type 11 Neighboring gene rabphilin 3A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Isolation and characterization of chicken TaxREB107, a putative DNA binding protein abundantly expressed in muscle. Thomson SR, et al. Gene, 2001 Oct 31. PMID 11707324

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    large ribosomal subunit protein eL6; 60S ribosomal protein L6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001396276.1 → NP_001383205.1  large ribosomal subunit protein eL6

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000260
      UniProtKB/TrEMBL
      A0A1L1RYC3, A0A8V0ZFC6, Q8UWG7
      Related
      ENSGALP00010029526.1, ENSGALT00010049986.1
      Conserved Domains (3) summary
      PRK14900
      Location:5 → 56
      valS; valyl-tRNA synthetase; Provisional
      cd13156
      Location:146 → 298
      KOW_RPL6; KOW motif of Ribosomal Protein L6
      pfam03868
      Location:47 → 105
      Ribosomal_L6e_N; Ribosomal protein L6, N-terminal domain

    2. NM_204152.2 → NP_989483.1  large ribosomal subunit protein eL6

      See identical proteins and their annotated locations for NP_989483.1

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000260
      UniProtKB/TrEMBL
      A0A1L1RYC3, A0A8V0ZFC6, Q8UWG7
      Related
      ENSGALP00010029522.1, ENSGALT00010049978.1
      Conserved Domains (3) summary
      PRK14900
      Location:5 → 56
      valS; valyl-tRNA synthetase; Provisional
      cd13156
      Location:146 → 298
      KOW_RPL6; KOW motif of Ribosomal Protein L6
      pfam03868
      Location:47 → 105
      Ribosomal_L6e_N; Ribosomal protein L6, N-terminal domain

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052546.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      6395368..6401507 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046901053.1 → XP_046757009.1  60S ribosomal protein L6 isoform X2

      UniProtKB/TrEMBL
      A0A1L1RYC3, Q8UWG7

    2. XM_046901052.1 → XP_046757008.1  60S ribosomal protein L6 isoform X1

    3. XM_046901055.1 → XP_046757011.1  60S ribosomal protein L6 isoform X2

      UniProtKB/TrEMBL
      A0A1L1RYC3, Q8UWG7
      Related
      ENSGALP00010029530.1, ENSGALT00010049992.1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052587.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      6408739..6412057 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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