eef1a1l1 eukaryotic translation elongation factor 1 alpha 1, like 1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: eef1a1l1provided by ZNC
Official Full Name: eukaryotic translation elongation factor 1 alpha 1, like 1provided by ZNC
Primary source: ZFIN:ZDB-GENE-990415-52
See related: Ensembl:ENSDARG00000020850 AllianceGenome:ZFIN:ZDB-GENE-990415-52
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: ef1a; eef1a; chunp6927; EFL1-alpha; tdsubc_2a3; wu:fa91c07; wu:fa94b03; wu:fi13b09; ik:tdsubc_2a3; ik:tdsubc_2b3; xx:tdsubc_2a3; xx:tdsubc_2b3
Summary: Predicted to enable GTPase activity and translation elongation factor activity. Predicted to be involved in translational elongation. Predicted to be located in cytoplasm. Is expressed in several structures, including integument; musculature system; nervous system; pleuroperitoneal region; and skeletal system. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

Location:: chromosome: 19

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	19	NC_007130.7 (43119014..43122337)
105	previous assembly	GRCz10 (GCF_000002035.5)	19	NC_007130.6 (43523417..43526740)

Chromosome 19 - NC_007130.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

fa91c07.x1 (e-PCR)
- UniSTS:202551

X77689 (e-PCR)
- UniSTS:186945

L47669 (e-PCR)
- UniSTS:205644

fa94b03.x1 (e-PCR)
- UniSTS:202587

fi13b09.x1 (e-PCR)
- UniSTS:196812

fi48f03.x1 (e-PCR)
- UniSTS:197624

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables GTP binding	IEA Inferred from Electronic Annotation more info
enables GTPase activity	IBA Inferred from Biological aspect of Ancestor more info
enables GTPase activity	IEA Inferred from Electronic Annotation more info
enables GTPase activity	ISS Inferred from Sequence or Structural Similarity more info
enables hydrolase activity	IEA Inferred from Electronic Annotation more info
enables nucleotide binding	IEA Inferred from Electronic Annotation more info
enables translation elongation factor activity	IBA Inferred from Biological aspect of Ancestor more info
enables translation elongation factor activity	IEA Inferred from Electronic Annotation more info
enables translation elongation factor activity	ISS Inferred from Sequence or Structural Similarity more info

Process	Evidence Code	Pubs
involved_in translation	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within translation	IEA Inferred from Electronic Annotation more info
involved_in translational elongation	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within translational elongation	IEA Inferred from Electronic Annotation more info
involved_in translational elongation	ISS Inferred from Sequence or Structural Similarity more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: elongation factor 1-alpha

Names: EF-1-alpha; ef-1 alpha

NP_571338.1

EC 3.6.5.-

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.