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    plekha8 pleckstrin homology domain containing A8 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100489403, updated on 25-Apr-2024

    Summary

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    Official Symbol
    plekha8provided by Xenbase
    Official Full Name
    pleckstrin homology domain containing A8provided by Xenbase
    Primary source
    Xenbase:XB-GENE-949914
    See related
    Ensembl:ENSXETG00000008997
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 6
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 6 NC_030682.2 (43663144..43701215)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 6 NC_030682.1 (80441526..80479105, complement)

    Chromosome 6 - NC_030682.2Genomic Context describing neighboring genes Neighboring gene secernin 1 Neighboring gene FKBP prolyl isomerase 14 Neighboring gene collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase Neighboring gene 2-hydroxyacyl-CoA lyase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables lipid transfer activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables mRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within intermembrane lipid transfer IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in negative regulation of smooth muscle cell differentiation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    pleckstrin homology domain-containing family A member 8
    Names
    pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030682.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      43663144..43701215
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012965568.3 → XP_012821022.2  pleckstrin homology domain-containing family A member 8 isoform X2

      UniProtKB/TrEMBL
      A0A803J3V7
      Related
      ENSXETP00000102524.1, ENSXETT00000109086.1
      Conserved Domains (2) summary
      cd01247
      Location:18 → 117
      PH_FAPP1_FAPP2; Four phosphate adaptor protein 1 and 2 Pleckstrin homology (PH) domain
      pfam08718
      Location:361 → 482
      GLTP; Glycolipid transfer protein (GLTP)

    2. XM_002932787.5 → XP_002932833.3  pleckstrin homology domain-containing family A member 8 isoform X1

      UniProtKB/TrEMBL
      F7B5U5
      Related
      ENSXETP00000019714.5, ENSXETT00000019714.5
      Conserved Domains (2) summary
      cd01247
      Location:18 → 117
      PH_FAPP1_FAPP2; Four phosphate adaptor protein 1 and 2 Pleckstrin homology (PH) domain
      pfam08718
      Location:361 → 494
      GLTP; Glycolipid transfer protein (GLTP)
    Nucleotide Protein Strain
    Heading Accession and Version

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