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    OOSP4B oocyte secreted protein family member 4B [ Homo sapiens (human) ]

    Gene ID: 107987155, updated on 14-Mar-2024

    Summary

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    Official Symbol
    OOSP4Bprovided by HGNC
    Official Full Name
    oocyte secreted protein family member 4Bprovided by HGNC
    Primary source
    HGNC:HGNC:53905
    See related
    Ensembl:ENSG00000255393 AllianceGenome:HGNC:53905
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Summary
    Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Low expression observed in reference dataset See more
    Orthologs
    all
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    Genomic context

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    See OOSP4B in Genome Data Viewer
    Location:
    11q12.1
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (60017181..60031095)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (59968469..59982382)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (59784654..59798568)

    Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene oocyte secreted protein 1 Neighboring gene Sharpr-MPRA regulatory region 15631 Neighboring gene oocyte secreted protein family member 4A Neighboring gene oocyte secreted protein 2 Neighboring gene membrane spanning 4-domains A3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    Genotypes

    General gene information

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    Homology

    Gene Ontology Provided by GOA

    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    oocyte-secreted protein 4B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001395278.3 → NP_001382207.2  oocyte-secreted protein 4B precursor

      Status: VALIDATED

      Source sequence(s)
      AP000790
      UniProtKB/Swiss-Prot
      A0A2R8Y4Y8
      Related
      ENSP00000494382.1, ENST00000642343.2

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

      Range
      60017181..60031095
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 PATCHES

    Genomic

    1. NW_019805498.1 Reference GRCh38.p14 PATCHES

      Range
      106836..120750
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060935.1 Alternate T2T-CHM13v2.0

      Range
      59968469..59982382
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001368161.2: Suppressed sequence

      Description
      NM_001368161.2: This RefSeq was removed because currently there is not sufficient data to support this transcript and the predicted protein.
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A2R8Y4Y8.1 GenPept UniProtKB/Swiss-Prot:A0A2R8Y4Y8

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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