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    GOLGA6L25 golgin A6 family like 25 [ Homo sapiens (human) ]

    Gene ID: 100132202, updated on 10-Oct-2023

    Summary

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    Official Symbol
    GOLGA6L25provided by HGNC
    Official Full Name
    golgin A6 family like 25provided by HGNC
    Primary source
    HGNC:HGNC:55711
    See related
    Ensembl:ENSG00000227717
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    GOLGA6L25P
    Expression
    Restricted expression toward testis (RPKM 11.7) See more
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    Genomic context

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    See GOLGA6L25 in Genome Data Viewer
    Location:
    15q13.1
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (28553568..28563779)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (26330280..26340490)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (28798714..28808925)

    Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene golgin A8 family member G Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:28777697-28778196 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:28790612-28791114 Neighboring gene MPHOSPH10 pseudogene 8 Neighboring gene pectinesterase inhibitor 10-like Neighboring gene HERC2 pseudogene 11

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    Genotypes

    General gene information

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    Homology

    General protein information

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    Preferred Names
    golgin subfamily A member 6-like protein 25
    Names
    golgin A6 family like 25, pseudogene
    golgin subfamily A member 6-like protein 22

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001365373.2 → NP_001352302.2  golgin subfamily A member 6-like protein 25

      Status: VALIDATED

      Source sequence(s)
      AC138749
      Consensus CDS
      CCDS91968.1
      UniProtKB/Swiss-Prot
      P0DX01
      UniProtKB/TrEMBL
      A0A087X1J6
      Related
      ENSP00000484257.2, ENST00000620691.5
      Conserved Domains (1) summary
      PTZ00121
      Location:158 → 762
      PTZ00121; MAEBL; Provisional

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

      Range
      28553568..28563779
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 PATCHES

    Genomic

    1. NW_011332701.1 Reference GRCh38.p14 PATCHES

      Range
      715573..725784
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 ALT_REF_LOCI_1

    Genomic

    1. NW_003315943.1 Reference GRCh38.p14 ALT_REF_LOCI_1

      Range
      253148..263359
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 ALT_REF_LOCI_2

    Genomic

    1. NT_187660.1 Reference GRCh38.p14 ALT_REF_LOCI_2

      Range
      829359..839570
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060939.1 Alternate T2T-CHM13v2.0

      Range
      26330280..26340490
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P0DX01.1 GenPept UniProtKB/Swiss-Prot:P0DX01

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials