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    RPS17A ribosomal 40S subunit protein S17A [ Saccharomyces cerevisiae S288C ]

    Gene ID: 854984, updated on 13-Apr-2024

    Summary

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    Gene symbol
    RPS17A
    Gene description
    ribosomal 40S subunit protein S17A
    Primary source
    SGD:S000004486
    Locus tag
    YML024W
    See related
    AllianceGenome:SGD:S000004486
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Also known as
    RP51A; RPL51A
    Summary
    Predicted to be a structural constituent of ribosome. Involved in ribosomal small subunit assembly. Predicted to be located in cytoplasm and ribosome. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 4. Orthologous to human RPS17 (ribosomal protein S17). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    Location:
    chromosome: XIII
    Exon count:
    2
    Sequence:
    Chromosome: XIII; NC_001145.3 (225889..226697)

    Chromosome XIII - NC_001145.3Genomic Context describing neighboring genes Neighboring gene ribosomal 40S subunit protein S18B Neighboring gene mitochondrial 54S ribosomal protein YmL6 Neighboring gene Smc5-Smc6 complex subunit NSE5 Neighboring gene adenine phosphoribosyltransferase APT1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001145.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Yeast pre-mRNA is composed of two populations with distinct kinetic properties. Elliott DJ, et al. Exp Cell Res, 1996 Dec 15. PMID 8986595
    2. Interaction between the first and last nucleotides of pre-mRNA introns is a determinant of 3' splice site selection in S. cerevisiae. Chanfreau G, et al. Nucleic Acids Res, 1994 Jun 11. PMID 8029003, Free PMC Article
    3. Evidence for the biochemical role of an internal sequence in yeast nuclear mRNA introns: implications for U1 RNA and metazoan mRNA splicing. Pikielny CW, et al. Cell, 1983 Sep. PMID 6616616
    4. Posttranscriptional regulation and assembly into ribosomes of a Saccharomyces cerevisiae ribosomal protein-beta-galactosidase fusion. Gritz L, et al. Mol Cell Biol, 1985 Dec. PMID 3939318, Free PMC Article
    5. Proteasome inhibition alters the transcription of multiple yeast genes. Dembla-Rajpal N, et al. Biochim Biophys Acta, 2004 Oct 5. PMID 15451170

    See all (87) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables structural constituent of ribosome NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic translation NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    involved_in ribosomal small subunit assembly IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of cytosolic small ribosomal subunit NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    ribosomal 40S subunit protein S17A
    NP_013688.1
    • Ribosomal protein 51 (rp51) of the small (40s) subunit; homologous to mammalian ribosomal protein S17, no bacterial homolog; RPS17A has a paralog, RPS17B, that arose from the whole genome duplication

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001145.3 Reference assembly

      Range
      225889..226697
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001182382.1 → NP_013688.1  TPA: ribosomal 40S subunit protein S17A [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_013688.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VZF0, P02407
      UniProtKB/TrEMBL
      A6ZM38, C8ZEI0, G2WK28, N1NY37
      Conserved Domains (1) summary
      pfam00833
      Location:1 → 115
      Ribosomal_S17e; Ribosomal S17
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    4U3M_C7.1
    4U3M_c7.1
    4U3N_C7.1
    4U3N_c7.1
    4U3U_C7.1
    4U3U_c7.1
    4U4N_C7.1
    4U4N_c7.1
    4U4O_C7.1
    4U4O_c7.1
    4U4Q_C7.1
    4U4Q_c7.1
    4U4R_C7.1
    4U4R_c7.1
    4U4U_C7.1
    4U4U_c7.1
    4U4Y_C7.1
    4U4Y_c7.1
    4U4Z_C7.1
    4U4Z_c7.1
    4U50_C7.1
    4U50_c7.1
    4U51_C7.1
    4U51_c7.1
    4U52_C7.1
    4U52_c7.1
    4U53_C7.1
    4U53_c7.1
    4U55_C7.1
    4U55_c7.1
    4U56_C7.1
    4U56_c7.1
    4U6F_C7.1
    4U6F_c7.1
    4V88_AR.1
    4V88_CR.1
    5DAT_C7.1
    5DAT_c7.1
    5DC3_C7.1
    5DC3_c7.1
    5DGE_C7.1
    5DGE_c7.1
    5DGF_C7.1
    5DGF_c7.1
    5DGV_C7.1
    5DGV_c7.1
    5FCI_C7.1
    5FCI_c7.1
    5FCJ_C7.1
    5FCJ_c7.1
    6EML_C.1
    6FAI_R.1
    6RBD_R.1
    6RBE_R.1
    6Y7C_R.1
    6ZCE_S.1
    6ZU9_I.1
    P02407.1

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